Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2525

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
2,998,484	+		Echvi_2524	0.17	+0.6
2,998,522	-		Echvi_2524	0.22	-1.0
2,998,645	+		Echvi_2524	0.36	-0.3
2,998,741	+		Echvi_2524	0.47	-1.5
2,998,954	+		Echvi_2524	0.71	-1.7
2,999,011	+		Echvi_2524	0.78	-1.7
2,999,012	-		Echvi_2524	0.78	+0.6
2,999,028	-		Echvi_2524	0.80	-1.4
2,999,193	-				-1.9
2,999,361	+				-1.3
2,999,586	+		Echvi_2525	0.25	-0.2
2,999,600	+		Echvi_2525	0.26	-1.0
2,999,609	-		Echvi_2525	0.27	-1.0
2,999,702	+		Echvi_2525	0.35	-0.6
2,999,703	-		Echvi_2525	0.35	-1.1
2,999,703	-		Echvi_2525	0.35	-0.6
2,999,712	-		Echvi_2525	0.36	-0.7
2,999,798	+		Echvi_2525	0.44	-1.2
2,999,803	-		Echvi_2525	0.44	-0.7
2,999,803	-		Echvi_2525	0.44	-0.9
2,999,826	-		Echvi_2525	0.47	-2.2
3,000,029	+		Echvi_2525	0.65	-0.8
3,000,047	+		Echvi_2525	0.67	-0.8
3,000,068	+		Echvi_2525	0.69	-0.7
3,000,069	-		Echvi_2525	0.69	+0.8
3,000,148	+		Echvi_2525	0.76	-0.4
3,000,290	+		Echvi_2525	0.89	+0.0
3,000,290	+		Echvi_2525	0.89	-0.9
3,000,291	-		Echvi_2525	0.89	-1.7
3,000,295	+		Echvi_2525	0.89	-0.9
3,000,360	-				-0.7
3,000,404	+				-0.6
3,000,404	+				+0.6
3,000,405	-				-0.1
3,000,405	-				+0.6
3,000,405	-				-2.2
3,000,415	-				+0.5
3,000,419	-				-1.6
3,000,436	-				-0.5
3,000,441	+				-0.9
3,000,441	+				+1.0
3,000,447	-				-0.2
3,000,495	+				+1.1
3,000,497	+				-1.0
3,000,498	-				+0.1
3,000,586	+		Echvi_2526	0.15	-1.7
3,000,712	+		Echvi_2526	0.27	-1.2
3,000,713	-		Echvi_2526	0.27	-0.9
3,000,724	+		Echvi_2526	0.28	+0.6
3,000,725	-		Echvi_2526	0.28	+0.1
3,000,725	-		Echvi_2526	0.28	-0.6
3,000,787	+		Echvi_2526	0.33	+0.3
3,000,788	-		Echvi_2526	0.34	-0.6
3,000,799	-		Echvi_2526	0.35	-0.5
3,000,799	-		Echvi_2526	0.35	+0.1
3,000,850	+		Echvi_2526	0.39	-0.2
3,000,851	-		Echvi_2526	0.39	+0.3
3,000,851	-		Echvi_2526	0.39	+1.4
3,000,963	+		Echvi_2526	0.50	+0.3
3,000,963	+		Echvi_2526	0.50	+2.2
3,001,013	-		Echvi_2526	0.54	-0.6
3,001,029	+		Echvi_2526	0.56	+1.1
3,001,030	-		Echvi_2526	0.56	-0.1
3,001,032	+		Echvi_2526	0.56	+0.9
3,001,033	-		Echvi_2526	0.56	-0.2
3,001,033	-		Echvi_2526	0.56	-0.8
3,001,033	-		Echvi_2526	0.56	-0.7
3,001,051	-		Echvi_2526	0.58	+1.1
3,001,066	+		Echvi_2526	0.59	+0.6
3,001,066	+		Echvi_2526	0.59	-1.8
3,001,067	-		Echvi_2526	0.59	-0.4
3,001,069	-		Echvi_2526	0.59	-0.7
3,001,069	-		Echvi_2526	0.59	+0.1
3,001,117	+		Echvi_2526	0.64	-0.2
3,001,117	+		Echvi_2526	0.64	+0.1
3,001,118	-		Echvi_2526	0.64	-1.0
3,001,118	-		Echvi_2526	0.64	+0.0
3,001,118	-		Echvi_2526	0.64	-0.5
3,001,258	-		Echvi_2526	0.77	+1.0
3,001,277	-		Echvi_2526	0.79	-0.7
3,001,344	+		Echvi_2526	0.85	+0.5
3,001,344	+		Echvi_2526	0.85	+0.4
3,001,345	-		Echvi_2526	0.85	-1.6
3,001,345	-		Echvi_2526	0.85	+0.0
3,001,387	-		Echvi_2526	0.89	+0.8
3,001,393	+		Echvi_2526	0.89	-1.0