Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1944

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
2,285,967	+				-2.0
2,285,970	-				-0.9
2,285,970	-				-1.9
2,286,039	+				-0.8
2,286,186	+		Echvi_1943	0.22	+0.3
2,286,187	-		Echvi_1943	0.22	-1.3
2,286,196	+		Echvi_1943	0.23	-0.8
2,286,196	+		Echvi_1943	0.23	-0.5
2,286,258	-		Echvi_1943	0.29	-0.7
2,286,283	-		Echvi_1943	0.32	+0.5
2,286,433	-		Echvi_1943	0.47	-0.6
2,286,455	-		Echvi_1943	0.49	-1.9
2,286,512	+		Echvi_1943	0.55	+0.2
2,286,512	+		Echvi_1943	0.55	-0.5
2,286,512	+		Echvi_1943	0.55	-0.6
2,286,513	-		Echvi_1943	0.55	+1.6
2,286,577	-		Echvi_1943	0.62	+0.7
2,286,596	+		Echvi_1943	0.64	+0.2
2,286,597	-		Echvi_1943	0.64	+0.5
2,286,601	-		Echvi_1943	0.64	+0.4
2,286,682	-		Echvi_1943	0.73	-0.6
2,286,719	+		Echvi_1943	0.76	-1.0
2,286,774	-		Echvi_1943	0.82	+1.5
2,286,848	+		Echvi_1943	0.90	-1.9
2,286,880	+				+0.2
2,286,880	+				+0.1
2,286,880	+				-0.3
2,286,920	-				-0.2
2,286,929	-				+0.9
2,286,929	-				-1.2
2,286,953	+				-1.8
2,287,050	+		Echvi_1944	0.16	-0.2
2,287,183	+		Echvi_1944	0.37	-0.6
2,287,183	+		Echvi_1944	0.37	-1.2
2,287,184	-		Echvi_1944	0.37	+0.4
2,287,184	-		Echvi_1944	0.37	+2.0
2,287,185	+		Echvi_1944	0.38	-0.7
2,287,191	+		Echvi_1944	0.38	+0.5
2,287,240	+		Echvi_1944	0.46	+0.3
2,287,240	+		Echvi_1944	0.46	-0.6
2,287,246	+		Echvi_1944	0.47	-1.3
2,287,246	+		Echvi_1944	0.47	-0.1
2,287,247	-		Echvi_1944	0.47	-0.0
2,287,292	+		Echvi_1944	0.54	-0.7
2,287,309	+		Echvi_1944	0.57	-0.2
2,287,432	+		Echvi_1944	0.76	-0.2
2,287,432	+		Echvi_1944	0.76	+0.1
2,287,432	+		Echvi_1944	0.76	-0.5
2,287,433	-		Echvi_1944	0.76	+1.0
2,287,433	-		Echvi_1944	0.76	+0.1
2,287,433	-		Echvi_1944	0.76	-0.4
2,287,571	+				+0.0
2,287,578	+				-0.7
2,287,583	+				+0.7
2,287,583	+				-0.0
2,287,583	+				-0.4
2,287,583	+				-1.1
2,287,584	-				+1.4
2,287,584	-				+1.7
2,287,584	-				-0.6
2,287,584	-				-0.3
2,287,584	-				+1.7
2,287,584	-				+1.3
2,287,584	-				-0.6
2,287,670	+		Echvi_1945	0.16	-0.2
2,287,670	+		Echvi_1945	0.16	-0.5
2,287,671	-		Echvi_1945	0.16	-1.3
2,287,736	+		Echvi_1945	0.26	-1.9
2,287,795	+		Echvi_1945	0.35	+0.3
2,287,840	+		Echvi_1945	0.42	+0.0
2,287,986	+		Echvi_1945	0.65	-0.5
2,288,209	-				+0.1
2,288,564	-		Echvi_1946	0.53	-0.6