Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1640

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,895,239	+		Echvi_1639	0.28	-0.6
1,895,283	-		Echvi_1639	0.31	-0.8
1,895,402	+		Echvi_1639	0.40	+0.8
1,895,405	+		Echvi_1639	0.40	+0.8
1,895,405	-		Echvi_1639	0.40	-0.0
1,895,440	+		Echvi_1639	0.43	+0.8
1,895,505	+		Echvi_1639	0.48	-0.1
1,895,533	+		Echvi_1639	0.50	-0.9
1,895,589	+		Echvi_1639	0.54	+2.1
1,895,589	+		Echvi_1639	0.54	-0.3
1,895,590	-		Echvi_1639	0.54	+1.8
1,895,590	-		Echvi_1639	0.54	-1.9
1,895,590	-		Echvi_1639	0.54	-0.1
1,895,689	+		Echvi_1639	0.61	-0.9
1,895,689	+		Echvi_1639	0.61	-1.9
1,895,690	-				+0.2
1,895,690	-		Echvi_1639	0.61	-1.1
1,895,757	+		Echvi_1639	0.66	+1.4
1,895,757	+		Echvi_1639	0.66	+0.5
1,895,764	+		Echvi_1639	0.67	-0.2
1,895,765	-		Echvi_1639	0.67	+0.7
1,895,765	-		Echvi_1639	0.67	+0.7
1,895,791	-		Echvi_1639	0.69	-0.6
1,895,791	-		Echvi_1639	0.69	-0.4
1,895,832	+		Echvi_1639	0.72	+0.4
1,895,833	-		Echvi_1639	0.72	+0.3
1,895,833	-		Echvi_1639	0.72	+0.6
1,895,833	-		Echvi_1639	0.72	-1.7
1,895,833	-		Echvi_1639	0.72	-0.2
1,895,834	+		Echvi_1639	0.72	+1.5
1,895,834	+		Echvi_1639	0.72	+0.2
1,895,835	-		Echvi_1639	0.72	-0.6
1,895,837	-		Echvi_1639	0.72	-0.7
1,895,837	-		Echvi_1639	0.72	+0.1
1,895,837	-		Echvi_1639	0.72	-0.7
1,895,837	-		Echvi_1639	0.72	-1.5
1,895,837	-		Echvi_1639	0.72	-0.8
1,895,867	-		Echvi_1639	0.74	+0.2
1,895,883	+		Echvi_1639	0.75	-0.2
1,895,883	+		Echvi_1639	0.75	+0.1
1,895,883	+		Echvi_1639	0.75	+0.1
1,895,883	+		Echvi_1639	0.75	+0.5
1,895,883	+		Echvi_1639	0.75	+0.1
1,895,884	-		Echvi_1639	0.75	-0.2
1,895,884	-		Echvi_1639	0.75	-0.3
1,895,886	-		Echvi_1639	0.76	+0.0
1,895,915	+		Echvi_1639	0.78	-0.2
1,895,915	+		Echvi_1639	0.78	+1.2
1,895,916	-		Echvi_1639	0.78	-1.2
1,895,916	-		Echvi_1639	0.78	-0.4
1,895,923	+		Echvi_1639	0.78	+1.0
1,895,923	+		Echvi_1639	0.78	+1.6
1,895,933	-		Echvi_1639	0.79	-1.6
1,895,974	-		Echvi_1639	0.82	+1.8
1,895,997	-		Echvi_1639	0.84	+0.9
1,896,023	+		Echvi_1639	0.86	+1.8
1,896,023	+		Echvi_1639	0.86	-0.1
1,896,024	-		Echvi_1639	0.86	+1.0
1,896,228	+				+3.3
1,896,229	-				-0.6
1,896,272	+				+2.2
1,896,294	+				+2.3
1,896,294	+				+0.6
1,896,294	+				-0.5
1,896,294	+				-0.3
1,896,295	-				+0.7
1,896,295	-				+0.3
1,896,299	-				+0.2
1,896,299	-				-0.1
1,896,305	-				+0.2
1,896,344	-		Echvi_1640	0.13	-0.9
1,896,344	-		Echvi_1640	0.13	-0.2
1,896,344	-		Echvi_1640	0.13	-0.2
1,896,354	+		Echvi_1640	0.14	-0.2
1,896,388	-		Echvi_1640	0.18	-0.4
1,896,490	-		Echvi_1640	0.30	-1.3
1,896,510	-		Echvi_1640	0.32	+0.3
1,896,567	-		Echvi_1640	0.38	-0.4
1,896,581	-		Echvi_1640	0.40	-0.7
1,896,606	-		Echvi_1640	0.43	+3.1
1,896,625	+		Echvi_1640	0.45	-0.7
1,896,697	-		Echvi_1640	0.53	-0.5
1,896,775	+		Echvi_1640	0.62	-1.0
1,896,775	+		Echvi_1640	0.62	-1.5
1,896,778	-		Echvi_1640	0.62	-0.3
1,896,778	-		Echvi_1640	0.62	+1.8
1,896,891	+		Echvi_1640	0.75	-0.2
1,896,891	+		Echvi_1640	0.75	+0.6
1,896,891	+		Echvi_1640	0.75	+0.9
1,896,891	+		Echvi_1640	0.75	-0.2
1,896,891	+		Echvi_1640	0.75	-1.7
1,896,892	-		Echvi_1640	0.75	-2.5
1,896,892	-		Echvi_1640	0.75	+0.3
1,896,892	-		Echvi_1640	0.75	-0.9
1,896,892	-		Echvi_1640	0.75	-0.9
1,896,892	-		Echvi_1640	0.75	+0.2
1,896,941	-		Echvi_1640	0.80	+0.2
1,896,941	-		Echvi_1640	0.80	+0.8
1,896,998	+		Echvi_1640	0.87	+0.0
1,896,998	+		Echvi_1640	0.87	-0.2
1,897,065	+				+0.2
1,897,065	+				-1.2
1,897,065	+				+0.0
1,897,066	-				-0.5
1,897,066	-				-0.2
1,897,066	-				-0.2
1,897,067	+				-0.0
1,897,129	+				-0.6
1,897,151	+				+0.2
1,897,162	+				-0.1
1,897,162	+				-0.8
1,897,163	-				+0.5
1,897,172	+				+0.2
1,897,173	-				+0.6
1,897,173	-				-0.8
1,897,177	+				-1.1
1,897,197	+				-0.4
1,897,197	+				-0.7
1,897,283	-				+0.2
1,897,283	-				+0.2
1,897,291	+				-0.6
1,897,296	+				+0.4
1,897,296	+				+1.0
1,897,300	-				+1.4
1,897,300	-				+1.3
1,897,352	-				-0.4
1,897,426	+				-0.9
1,897,426	+				+0.4
1,897,426	+				-1.4
1,897,427	-				+0.8
1,897,430	+				-0.5
1,897,431	-				-1.1
1,897,437	+				+0.4
1,897,438	-				+0.0
1,897,457	+				-0.1
1,897,458	-				-0.3
1,897,488	+				-0.2
1,897,488	+				-0.1
1,897,489	-				-1.4
1,897,489	-				+0.2
1,897,489	-				-0.3
1,897,489	-				+0.5
1,897,489	-				+0.7
1,897,533	+				-0.3
1,897,534	-				+1.2
1,897,536	-				-1.4
1,897,536	-				-0.4
1,897,536	-				+1.2
1,897,543	+				-1.2
1,897,543	+				+0.5
1,897,543	+				-0.1
1,897,543	+				-0.5
1,897,544	-				-0.4
1,897,544	-				-2.5
1,897,586	+		Echvi_1641	0.13	-0.3
1,897,587	-		Echvi_1641	0.13	+1.3
1,897,587	-		Echvi_1641	0.13	-0.8
1,897,734	+		Echvi_1641	0.30	+0.4
1,897,778	+		Echvi_1641	0.35	+0.4
1,897,779	-		Echvi_1641	0.35	-0.6
1,897,779	-		Echvi_1641	0.35	+0.3
1,897,856	+		Echvi_1641	0.44	+0.1
1,897,856	+		Echvi_1641	0.44	-0.2
1,897,856	+		Echvi_1641	0.44	+1.0
1,897,856	+		Echvi_1641	0.44	-0.2
1,897,857	-		Echvi_1641	0.44	+1.5
1,897,888	+		Echvi_1641	0.48	-0.2
1,897,888	+		Echvi_1641	0.48	-0.1
1,897,889	-		Echvi_1641	0.48	-0.2
1,897,889	-		Echvi_1641	0.48	-0.7
1,897,889	-		Echvi_1641	0.48	-0.1
1,897,889	-		Echvi_1641	0.48	-0.6
1,897,889	-		Echvi_1641	0.48	-0.4
1,897,915	+		Echvi_1641	0.51	-0.7
1,897,915	+		Echvi_1641	0.51	-0.8
1,897,915	+		Echvi_1641	0.51	+0.1
1,897,916	-		Echvi_1641	0.51	-0.6
1,897,919	+		Echvi_1641	0.51	-0.3
1,897,919	+		Echvi_1641	0.51	-0.2
1,897,919	+		Echvi_1641	0.51	-0.2
1,897,920	-		Echvi_1641	0.51	+1.8
1,897,920	-		Echvi_1641	0.51	-0.2
1,897,920	-		Echvi_1641	0.51	+0.3
1,897,924	+		Echvi_1641	0.52	-0.5
1,897,974	+		Echvi_1641	0.58	-1.6
1,897,974	+		Echvi_1641	0.58	+0.8
1,897,975	-		Echvi_1641	0.58	-0.2
1,898,038	-		Echvi_1641	0.65	-0.7
1,898,039	+		Echvi_1641	0.65	-0.6
1,898,039	+		Echvi_1641	0.65	+0.2
1,898,039	+		Echvi_1641	0.65	-0.1
1,898,039	+		Echvi_1641	0.65	-0.0
1,898,039	+		Echvi_1641	0.65	-0.4