Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0967

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,117,634	-		Echvi_0966	0.54	+2.1
1,117,728	+		Echvi_0966	0.59	+0.0
1,117,729	-		Echvi_0966	0.59	-0.5
1,117,729	-		Echvi_0966	0.59	+2.6
1,117,765	-		Echvi_0966	0.61	-0.5
1,117,765	-		Echvi_0966	0.61	-0.1
1,117,880	+		Echvi_0966	0.67	+1.2
1,117,881	-		Echvi_0966	0.67	-1.1
1,117,881	-		Echvi_0966	0.67	+0.7
1,117,882	+		Echvi_0966	0.67	-0.9
1,117,882	+		Echvi_0966	0.67	+0.5
1,117,882	+		Echvi_0966	0.67	-0.3
1,117,883	-		Echvi_0966	0.67	+0.6
1,117,883	-		Echvi_0966	0.67	-0.3
1,117,883	-		Echvi_0966	0.67	+1.4
1,117,883	-		Echvi_0966	0.67	+0.4
1,117,883	-		Echvi_0966	0.67	-0.3
1,117,936	-		Echvi_0966	0.70	-0.0
1,117,952	-		Echvi_0966	0.71	-0.8
1,117,991	+		Echvi_0966	0.73	-0.2
1,117,991	+		Echvi_0966	0.73	-0.8
1,117,991	+		Echvi_0966	0.73	+0.8
1,118,152	-		Echvi_0966	0.82	-0.5
1,118,201	+		Echvi_0966	0.85	-0.9
1,118,218	-		Echvi_0966	0.86	-0.3
1,118,271	-		Echvi_0966	0.89	-1.0
1,118,321	-				+1.8
1,118,345	+				+0.1
1,118,346	-				-0.5
1,118,348	+				-0.7
1,118,348	+				-0.3
1,118,349	-				+0.3
1,118,349	-				-1.2
1,118,415	+				+1.3
1,118,416	-				+0.2
1,118,471	-				-1.2
1,118,481	+				-1.4
1,118,482	-				+0.2
1,118,482	-				+0.1
1,118,482	-				-1.1
1,118,483	+				+0.5
1,118,484	-				+0.9
1,118,484	-				+0.0
1,118,484	-				+0.1
1,118,518	+				+0.3
1,118,636	+		Echvi_0967	0.10	+0.2
1,118,636	+		Echvi_0967	0.10	-0.3
1,118,636	+		Echvi_0967	0.10	-0.5
1,118,636	+		Echvi_0967	0.10	-0.2
1,118,647	+		Echvi_0967	0.11	+0.3
1,118,648	-		Echvi_0967	0.11	+0.4
1,118,648	-		Echvi_0967	0.11	-0.7
1,118,665	+		Echvi_0967	0.12	+0.7
1,118,665	+		Echvi_0967	0.12	-0.0
1,118,665	+		Echvi_0967	0.12	+1.8
1,118,666	-		Echvi_0967	0.12	+0.8
1,118,666	-		Echvi_0967	0.12	-1.0
1,118,666	-		Echvi_0967	0.12	+0.7
1,118,751	+		Echvi_0967	0.18	+0.2
1,118,757	+		Echvi_0967	0.19	+2.0
1,118,758	-		Echvi_0967	0.19	+0.6
1,118,818	+		Echvi_0967	0.23	-0.6
1,118,818	+		Echvi_0967	0.23	+0.4
1,118,819	-		Echvi_0967	0.23	-0.5
1,118,819	-		Echvi_0967	0.23	-0.1
1,118,819	-		Echvi_0967	0.23	-0.6
1,118,820	+		Echvi_0967	0.23	+0.1
1,118,820	+		Echvi_0967	0.23	-0.5
1,118,821	-		Echvi_0967	0.23	+0.0
1,118,821	-		Echvi_0967	0.23	-0.0
1,118,826	+		Echvi_0967	0.23	-0.4
1,118,826	+		Echvi_0967	0.23	+0.7
1,118,900	+		Echvi_0967	0.29	+0.8
1,118,900	+		Echvi_0967	0.29	-0.2
1,118,908	+		Echvi_0967	0.29	-1.0
1,118,908	+		Echvi_0967	0.29	-0.7
1,118,908	+		Echvi_0967	0.29	+0.6
1,118,908	+		Echvi_0967	0.29	-0.0
1,118,909	-		Echvi_0967	0.29	-0.3
1,118,909	-		Echvi_0967	0.29	+0.9
1,118,950	+		Echvi_0967	0.32	+0.1
1,118,950	+		Echvi_0967	0.32	+0.3
1,118,951	-		Echvi_0967	0.32	-0.4
1,118,951	-		Echvi_0967	0.32	+1.8
1,118,951	-		Echvi_0967	0.32	+0.1
1,118,952	+		Echvi_0967	0.32	+1.4
1,118,953	-		Echvi_0967	0.32	+1.4
1,119,018	+		Echvi_0967	0.37	+1.2
1,119,018	+		Echvi_0967	0.37	-0.5
1,119,019	-		Echvi_0967	0.37	-0.5
1,119,019	-		Echvi_0967	0.37	+1.5
1,119,019	-		Echvi_0967	0.37	+2.4
1,119,069	-		Echvi_0967	0.40	+0.3
1,119,085	+		Echvi_0967	0.41	+0.7
1,119,124	-		Echvi_0967	0.44	-0.7
1,119,124	-		Echvi_0967	0.44	-0.5
1,119,127	+		Echvi_0967	0.44	+0.8
1,119,128	-		Echvi_0967	0.44	+0.3
1,119,128	-		Echvi_0967	0.44	+0.0
1,119,138	+		Echvi_0967	0.45	+1.0
1,119,138	+		Echvi_0967	0.45	-0.1
1,119,139	-		Echvi_0967	0.45	+0.3
1,119,145	+		Echvi_0967	0.45	-0.7
1,119,157	+		Echvi_0967	0.46	-0.2
1,119,157	+		Echvi_0967	0.46	+0.4
1,119,158	-		Echvi_0967	0.46	+1.0
1,119,158	-		Echvi_0967	0.46	-0.3
1,119,159	+		Echvi_0967	0.46	+1.3
1,119,159	+		Echvi_0967	0.46	-1.0
1,119,159	+		Echvi_0967	0.46	-0.8
1,119,160	-		Echvi_0967	0.47	+0.4
1,119,160	-		Echvi_0967	0.47	+0.2
1,119,189	+		Echvi_0967	0.49	+0.0
1,119,239	+		Echvi_0967	0.52	-0.6
1,119,261	+		Echvi_0967	0.53	+0.7
1,119,262	-		Echvi_0967	0.54	+0.5
1,119,262	-		Echvi_0967	0.54	+0.4
1,119,262	-		Echvi_0967	0.54	-0.8
1,119,269	+		Echvi_0967	0.54	-0.3
1,119,269	+		Echvi_0967	0.54	-0.2
1,119,269	+		Echvi_0967	0.54	-0.4
1,119,302	-		Echvi_0967	0.56	+0.7
1,119,486	+		Echvi_0967	0.69	+0.3
1,119,566	+		Echvi_0967	0.75	-0.7
1,119,566	+		Echvi_0967	0.75	+0.8
1,119,571	+		Echvi_0967	0.75	+0.2
1,119,573	+		Echvi_0967	0.75	+1.8
1,119,573	+		Echvi_0967	0.75	-0.3
1,119,573	+		Echvi_0967	0.75	-0.1
1,119,574	-		Echvi_0967	0.75	-0.2
1,119,574	-		Echvi_0967	0.75	+0.5
1,119,574	-		Echvi_0967	0.75	-0.1
1,119,585	-		Echvi_0967	0.76	+0.1
1,119,592	+		Echvi_0967	0.76	-0.4
1,119,627	+		Echvi_0967	0.79	+0.4
1,119,641	-		Echvi_0967	0.80	-1.1
1,119,708	+		Echvi_0967	0.84	-0.0
1,119,753	-		Echvi_0967	0.87	+0.0
1,119,757	+		Echvi_0967	0.88	-1.3
1,119,757	+		Echvi_0967	0.88	-0.3
1,119,759	+		Echvi_0967	0.88	+0.8
1,119,796	+				+0.1
1,119,797	-				-2.6
1,119,850	+				+1.8
1,119,850	+				+2.6
1,119,851	-				+0.3
1,119,857	-				+0.5
1,119,857	-				+0.7
1,119,868	+				-0.8
1,119,947	+				-0.3
1,119,974	-				-1.2
1,120,176	+				-0.9
1,120,177	-				+0.1
1,120,235	-				+0.1
1,120,327	+				+0.2
1,120,327	+				-0.0
1,120,327	+				+2.6
1,120,327	+				+0.3
1,120,328	-				-1.2
1,120,328	-				-0.1
1,120,328	-				-1.0
1,120,331	+				-0.6
1,120,331	+				-0.7
1,120,331	+				+0.3
1,120,331	+				+1.8
1,120,332	-				+0.4
1,120,420	-		Echvi_0968	0.11	+0.8
1,120,471	+		Echvi_0968	0.15	+0.3
1,120,472	-		Echvi_0968	0.15	+1.2
1,120,478	+		Echvi_0968	0.15	+2.8
1,120,479	-		Echvi_0968	0.15	+0.9
1,120,481	-		Echvi_0968	0.15	-0.5
1,120,566	+		Echvi_0968	0.22	+0.1
1,120,566	+		Echvi_0968	0.22	+0.5
1,120,619	+		Echvi_0968	0.26	-1.1
1,120,620	-		Echvi_0968	0.26	-1.5
1,120,620	-		Echvi_0968	0.26	-1.3
1,120,726	-		Echvi_0968	0.34	-0.2
1,120,726	-		Echvi_0968	0.34	+0.6
1,120,769	+		Echvi_0968	0.37	+0.8
1,120,770	-		Echvi_0968	0.37	-0.7
1,120,770	-		Echvi_0968	0.37	+1.6
1,120,844	+		Echvi_0968	0.42	-0.1
1,120,845	-		Echvi_0968	0.42	-0.5
1,120,845	-		Echvi_0968	0.42	-0.2
1,120,845	-		Echvi_0968	0.42	-0.5
1,120,871	+		Echvi_0968	0.44	+0.1
1,120,871	+		Echvi_0968	0.44	+1.1
1,120,871	+		Echvi_0968	0.44	+0.3
1,120,871	+		Echvi_0968	0.44	-0.8
1,120,872	-		Echvi_0968	0.44	-2.0
1,120,873	+		Echvi_0968	0.44	+0.6