Strain Fitness in Escherichia coli BW25113 around b4646

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
3,401,713	-	yhdH	b3253	0.21	-0.5
3,401,723	-	yhdH	b3253	0.22	+1.0
3,401,723	-	yhdH	b3253	0.22	+0.0
3,401,792	-	yhdH	b3253	0.29	-0.1
3,401,792	-	yhdH	b3253	0.29	+0.9
3,401,792	-	yhdH	b3253	0.29	-0.7
3,401,851	-	yhdH	b3253	0.35	+1.6
3,401,851	-	yhdH	b3253	0.35	+0.0
3,401,965	+	yhdH	b3253	0.47	+0.1
3,402,006	-	yhdH	b3253	0.51	-1.9
3,402,019	-	yhdH	b3253	0.53	-0.8
3,402,019	-	yhdH	b3253	0.53	+0.5
3,402,034	+	yhdH	b3253	0.54	+0.6
3,402,071	+	yhdH	b3253	0.58	+0.5
3,402,076	+	yhdH	b3253	0.58	-0.1
3,402,076	+	yhdH	b3253	0.58	+1.0
3,402,160	+	yhdH	b3253	0.67	-0.2
3,402,180	-	yhdH	b3253	0.69	+0.7
3,402,220	-	yhdH	b3253	0.73	+0.5
3,402,243	-	yhdH	b3253	0.76	-1.0
3,402,296	+	yhdH	b3253	0.81	+1.0
3,402,296	+	yhdH	b3253	0.81	+0.6
3,402,296	+	yhdH	b3253	0.81	+0.5
3,402,300	+	yhdH	b3253	0.81	+0.5
3,402,300	+	yhdH	b3253	0.81	+0.6
3,402,305	+	yhdH	b3253	0.82	-0.4
3,402,305	+	yhdH	b3253	0.82	-0.4
3,402,319	+	yhdH	b3253	0.83	+0.8
3,402,327	-	yhdH	b3253	0.84	+0.8
3,402,327	-	yhdH	b3253	0.84	+0.0
3,402,381	-	yhdH	b3253	0.90	-0.8
3,402,381	-	yhdH	b3253	0.90	-0.1
3,402,448	+				-0.8
3,402,450	-				-0.1
3,402,473	-				+0.0
3,402,473	-				-0.5
3,402,496	+				+0.3
3,402,496	+				-0.3
3,402,588	+	yrdF	b4697	0.50	+0.0
3,402,595	+	yrdF	b4697	0.55	-0.1
3,402,677	+				+0.0
3,402,715	-	yrdE	b4646	0.14	+0.0
3,402,715	-	yrdE	b4646	0.14	-0.4
3,402,726	+	yrdE	b4646	0.17	-0.7
3,402,726	+	yrdE	b4646	0.17	-0.1
3,402,741	-	yrdE	b4646	0.21	+0.0
3,402,741	-	yrdE	b4646	0.21	-0.5
3,402,812	+	yrdE	b4646	0.39	-0.5
3,402,836	+	yrdE	b4646	0.45	-1.8
3,403,197	-				-1.3
3,403,370	+				+1.4
3,403,372	+				+1.6
3,403,372	+				-0.5
3,403,374	+				+0.2