Strain Fitness in Escherichia coli BW25113 around b3794

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
3,978,002	+				+1.2
3,978,004	+				+1.3
3,978,004	+				-0.4
3,978,004	+				-1.5
3,978,012	-				-2.6
3,978,017	-				-1.0
3,978,017	-				+0.1
3,978,024	+				-1.3
3,978,056	-	rffM	b3794	0.10	-0.1
3,978,066	-	rffM	b3794	0.12	-0.7
3,978,066	-	rffM	b3794	0.12	-1.3
3,978,083	+	rffM	b3794	0.14	-2.4
3,978,090	-	rffM	b3794	0.15	-1.3
3,978,138	-	rffM	b3794	0.21	+0.2
3,978,138	-	rffM	b3794	0.21	+0.3
3,978,140	-	rffM	b3794	0.22	-0.2
3,978,167	-	rffM	b3794	0.25	+0.1
3,978,199	+	rffM	b3794	0.30	-0.7
3,978,199	+	rffM	b3794	0.30	-0.5
3,978,202	-	rffM	b3794	0.30	-0.8
3,978,249	-	rffM	b3794	0.36	-2.5
3,978,274	+	rffM	b3794	0.40	-0.1
3,978,274	+	rffM	b3794	0.40	-0.0
3,978,291	+	rffM	b3794	0.42	-1.0
3,978,314	-	rffM	b3794	0.45	-1.3
3,978,314	-	rffM	b3794	0.45	+1.0
3,978,323	+	rffM	b3794	0.46	-0.7
3,978,323	+	rffM	b3794	0.46	-0.1
3,978,472	+	rffM	b3794	0.67	-1.2
3,978,472	+	rffM	b3794	0.67	-0.4
3,978,540	+	rffM	b3794	0.76	-2.3
3,978,540	+	rffM	b3794	0.76	-0.4
3,978,542	+	rffM	b3794	0.76	-0.3
3,978,542	+	rffM	b3794	0.76	-1.3
3,978,542	+	rffM	b3794	0.76	-1.4
3,978,550	-	rffM	b3794	0.77	-1.2
3,978,570	+	rffM	b3794	0.80	-1.5
3,978,618	+	rffM	b3794	0.86	-0.5
3,978,618	+	rffM	b3794	0.86	-0.4
3,978,693	-				+0.9
3,978,693	-				+3.3
3,978,698	+				-1.3
3,978,709	-				+0.9
3,978,753	-				+0.8
3,978,858	-				-1.9
3,978,858	-				+0.5
3,978,863	+				+1.3
3,978,886	+				+0.3
3,978,886	+				+1.8
3,978,896	-				-0.1
3,978,928	+				-0.2
3,978,944	-				+1.9
3,978,956	+				+0.3
3,978,956	+				+0.3
3,978,970	+				-1.9
3,978,970	+				+0.1
3,978,978	-				+0.9
3,978,978	-				+0.8
3,978,978	-				-0.4
3,978,979	-				+0.8
3,978,999	+				+0.3
3,979,011	+				+0.1
3,979,024	-				+1.3
3,979,028	-				-0.7
3,979,045	-				-0.7
3,979,045	-				+2.9
3,979,047	-				-2.2
3,979,047	-				+0.1
3,979,058	-	yifK	b3795	0.11	+0.6
3,979,063	-	yifK	b3795	0.11	+0.8
3,979,153	+	yifK	b3795	0.18	+0.1
3,979,176	-	yifK	b3795	0.19	-1.5
3,979,185	+	yifK	b3795	0.20	+0.6
3,979,186	-	yifK	b3795	0.20	-0.0
3,979,186	-	yifK	b3795	0.20	-0.1
3,979,199	+	yifK	b3795	0.21	+0.3
3,979,212	-	yifK	b3795	0.22	-0.3
3,979,281	+	yifK	b3795	0.27	+1.3
3,979,281	+	yifK	b3795	0.27	+0.5
3,979,309	-	yifK	b3795	0.29	-0.3
3,979,344	-	yifK	b3795	0.31	-0.7
3,979,344	-	yifK	b3795	0.31	+2.5
3,979,344	-	yifK	b3795	0.31	-0.4
3,979,344	-	yifK	b3795	0.31	+1.3
3,979,472	+	yifK	b3795	0.41	-0.7
3,979,479	-	yifK	b3795	0.41	-0.6
3,979,527	+	yifK	b3795	0.45	+0.6
3,979,527	+	yifK	b3795	0.45	+0.6
3,979,553	-	yifK	b3795	0.46	+0.4
3,979,599	+	yifK	b3795	0.50	+0.9
3,979,696	+	yifK	b3795	0.57	-0.2
3,979,696	+	yifK	b3795	0.57	-0.7
3,979,717	-	yifK	b3795	0.58	+0.0