Strain Fitness in Escherichia coli BW25113 around b2977
Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 2 mM |
---|---|---|---|---|---|
remove | |||||
3,121,026 | - | glcB | b2976 | 0.63 | -0.7 |
3,121,036 | - | glcB | b2976 | 0.64 | -0.8 |
3,121,038 | - | glcB | b2976 | 0.64 | -0.7 |
3,121,118 | - | glcB | b2976 | 0.67 | -0.6 |
3,121,175 | + | glcB | b2976 | 0.70 | -1.4 |
3,121,175 | + | glcB | b2976 | 0.70 | -0.1 |
3,121,223 | + | glcB | b2976 | 0.72 | -0.6 |
3,121,251 | + | glcB | b2976 | 0.73 | +0.4 |
3,121,258 | - | glcB | b2976 | 0.74 | +1.9 |
3,121,258 | - | +2.5 | |||
3,121,269 | + | glcB | b2976 | 0.74 | -0.5 |
3,121,269 | + | glcB | b2976 | 0.74 | +0.1 |
3,121,383 | - | glcB | b2976 | 0.80 | -0.3 |
3,121,407 | - | glcB | b2976 | 0.81 | -0.8 |
3,121,408 | + | glcB | b2976 | 0.81 | +0.4 |
3,121,419 | - | glcB | b2976 | 0.81 | -0.5 |
3,121,419 | - | glcB | b2976 | 0.81 | +0.2 |
3,121,556 | + | glcB | b2976 | 0.87 | -0.1 |
3,121,564 | - | glcB | b2976 | 0.88 | +0.5 |
3,121,574 | - | glcB | b2976 | 0.88 | +0.4 |
3,121,672 | - | +0.6 | |||
3,121,735 | + | -0.3 | |||
3,121,735 | + | +0.7 | |||
3,121,812 | - | +0.7 | |||
3,121,812 | - | +0.2 | |||
3,121,863 | - | -0.3 | |||
3,121,877 | + | -0.8 | |||
3,121,976 | + | glcG | b2977 | 0.31 | -0.8 |
3,121,976 | + | glcG | b2977 | 0.31 | +1.6 |
3,121,992 | - | glcG | b2977 | 0.35 | +0.5 |
3,121,992 | - | glcG | b2977 | 0.35 | +0.9 |
3,122,025 | + | glcG | b2977 | 0.43 | +1.5 |
3,122,025 | + | glcG | b2977 | 0.43 | +0.4 |
3,122,033 | + | glcG | b2977 | 0.45 | +1.6 |
3,122,069 | + | glcG | b2977 | 0.54 | -0.7 |
3,122,319 | + | +0.0 | |||
3,122,433 | - | glcF | b4467 | 0.14 | +0.9 |
3,122,433 | - | glcF | b4467 | 0.14 | +0.3 |
3,122,531 | + | glcF | b4467 | 0.22 | +0.3 |
3,122,556 | + | glcF | b4467 | 0.24 | -0.3 |
3,122,567 | + | glcF | b4467 | 0.25 | -0.0 |
3,122,704 | + | glcF | b4467 | 0.36 | -1.4 |
3,122,711 | - | glcF | b4467 | 0.37 | +0.5 |
3,122,861 | + | glcF | b4467 | 0.49 | -0.4 |
3,122,886 | - | glcF | b4467 | 0.51 | -1.9 |
3,122,908 | - | glcF | b4467 | 0.53 | -0.1 |
3,122,908 | - | glcF | b4467 | 0.53 | +1.5 |
3,122,940 | + | glcF | b4467 | 0.56 | +0.2 |
3,122,940 | + | glcF | b4467 | 0.56 | +0.3 |
3,122,940 | + | glcF | b4467 | 0.56 | +1.0 |
3,122,981 | + | glcF | b4467 | 0.59 | +1.1 |
3,122,981 | + | glcF | b4467 | 0.59 | -0.1 |
3,122,981 | + | glcF | b4467 | 0.59 | +0.9 |
3,123,039 | - | glcF | b4467 | 0.64 | +1.9 |
3,123,217 | + | glcF | b4467 | 0.78 | -0.1 |
3,123,219 | + | glcF | b4467 | 0.79 | +0.7 |
Or see this region's nucleotide sequence