Strain Fitness in Escherichia coli BW25113 around b2055

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
2,125,941	-	gmd	b2053	0.65	-1.1
2,126,048	+	gmd	b2053	0.74	-0.8
2,126,090	-	gmd	b2053	0.78	+0.5
2,126,093	-	gmd	b2053	0.78	+1.0
2,126,151	+	gmd	b2053	0.83	+0.2
2,126,181	-	gmd	b2053	0.86	+0.0
2,126,225	-	gmd	b2053	0.90	+0.8
2,126,225	-	gmd	b2053	0.90	+0.7
2,126,247	-				-0.5
2,126,247	-				-0.3
2,126,247	-				-0.1
2,126,267	+				-0.5
2,126,388	+				-0.5
2,126,398	-				-2.1
2,126,451	-				-0.5
2,126,451	-	wcaF	b2054	0.16	-1.9
2,126,456	-	wcaF	b2054	0.17	-1.5
2,126,456	-	wcaF	b2054	0.17	-0.5
2,126,498	+	wcaF	b2054	0.24	-0.5
2,126,515	+	wcaF	b2054	0.28	-0.3
2,126,550	-	wcaF	b2054	0.34	+0.3
2,126,550	-	wcaF	b2054	0.34	-1.0
2,126,562	+	wcaF	b2054	0.36	+0.8
2,126,562	-	wcaF	b2054	0.36	-0.6
2,126,562	-	wcaF	b2054	0.36	-0.8
2,126,577	+	wcaF	b2054	0.39	-0.3
2,126,577	+	wcaF	b2054	0.39	-0.1
2,126,584	-	wcaF	b2054	0.40	+0.8
2,126,587	+	wcaF	b2054	0.41	-0.7
2,126,614	+	wcaF	b2054	0.46	+0.5
2,126,616	+	wcaF	b2054	0.46	+0.4
2,126,621	+	wcaF	b2054	0.47	-1.0
2,126,629	+	wcaF	b2054	0.48	+1.6
2,126,660	-	wcaF	b2054	0.54	-1.3
2,126,681	+	wcaF	b2054	0.58	-0.3
2,126,681	+	wcaF	b2054	0.58	-0.3
2,126,914	+				-0.5
2,127,243	-	wcaE	b2055	0.42	-1.8
2,127,467	-	wcaE	b2055	0.72	+0.2
2,127,583	+	wcaE	b2055	0.88	+1.5
2,127,584	+	wcaE	b2055	0.88	-0.8
2,127,617	+				-1.6
2,127,663	+				-1.9
2,127,663	+				-1.5
2,128,019	-	wcaD	b2056	0.27	-0.4
2,128,137	-	wcaD	b2056	0.37	-0.9
2,128,137	-	wcaD	b2056	0.37	-0.8
2,128,146	-	wcaD	b2056	0.38	-0.7
2,128,222	-	wcaD	b2056	0.44	+0.5
2,128,251	-	wcaD	b2056	0.46	-2.0
2,128,259	-	wcaD	b2056	0.47	-0.1
2,128,259	-	wcaD	b2056	0.47	-0.4
2,128,280	-	wcaD	b2056	0.49	-0.9
2,128,280	-	wcaD	b2056	0.49	-0.0
2,128,280	-	wcaD	b2056	0.49	-0.5
2,128,299	-	wcaD	b2056	0.50	+1.0
2,128,304	-	wcaD	b2056	0.51	-0.3
2,128,309	-	wcaD	b2056	0.51	-0.1
2,128,324	-	wcaD	b2056	0.52	+0.7
2,128,324	-	wcaD	b2056	0.52	+0.7
2,128,355	-	wcaD	b2056	0.55	+1.1
2,128,439	-	wcaD	b2056	0.62	-0.1
2,128,439	-	wcaD	b2056	0.62	+0.3
2,128,475	-	wcaD	b2056	0.65	-1.2
2,128,527	+	wcaD	b2056	0.69	+1.1
2,128,527	+	wcaD	b2056	0.69	+0.5
2,128,530	-	wcaD	b2056	0.69	-0.7
2,128,530	-	wcaD	b2056	0.69	-0.5
2,128,531	-	wcaD	b2056	0.69	+0.8
2,128,531	-	wcaD	b2056	0.69	-0.3
2,128,531	-	wcaD	b2056	0.69	+0.5
2,128,531	-	wcaD	b2056	0.69	+0.4
2,128,535	-	wcaD	b2056	0.70	-0.1
2,128,535	-	wcaD	b2056	0.70	+0.5
2,128,545	+	wcaD	b2056	0.71	-2.8
2,128,604	+	wcaD	b2056	0.75	-0.8
2,128,604	+	wcaD	b2056	0.75	+0.1
2,128,604	+	wcaD	b2056	0.75	+0.1
2,128,604	+	wcaD	b2056	0.75	-0.7
2,128,612	-	wcaD	b2056	0.76	+1.1
2,128,612	-	wcaD	b2056	0.76	+1.0
2,128,612	-	wcaD	b2056	0.76	+0.2
2,128,614	+	wcaD	b2056	0.76	+0.2
2,128,617	+	wcaD	b2056	0.77	-0.5
2,128,667	-	wcaD	b2056	0.81	-0.5
2,128,668	-	wcaD	b2056	0.81	-0.6