Strain Fitness in Escherichia coli BW25113 around b1176

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
1,223,902	-	minD	b1175	0.16	-1.4
1,223,936	-	minD	b1175	0.20	-1.0
1,223,941	-	minD	b1175	0.21	+1.4
1,223,941	-	minD	b1175	0.21	-0.3
1,224,022	-	minD	b1175	0.31	-0.1
1,224,061	+	minD	b1175	0.36	-0.7
1,224,461	-	minD	b1175	0.85	-0.5
1,224,461	-	minD	b1175	0.85	-0.2
1,224,509	-				-1.1
1,224,534	+				-1.3
1,224,577	-				+0.2
1,224,684	+	minC	b1176	0.11	+0.4
1,224,784	+	minC	b1176	0.25	-0.9
1,224,854	-	minC	b1176	0.35	-1.7
1,225,133	-	minC	b1176	0.75	-2.1
1,225,151	-	minC	b1176	0.78	+0.1
1,225,151	-	minC	b1176	0.78	-1.2
1,225,310	-				-0.7
1,225,310	-				-1.2
1,225,329	+				-0.3
1,225,354	-				-0.3
1,225,380	-				-0.9
1,225,382	+				-2.6
1,225,405	-				+0.2
1,225,606	+				+0.5
1,225,672	-				+0.2
1,225,677	+				+1.4
1,225,677	+				-0.2
1,225,688	+				-0.4
1,225,688	+				+0.6
1,225,692	+				+1.1
1,225,693	-				-0.1
1,225,700	-				-0.6
1,225,700	-				-1.8
1,225,712	+				+0.3
1,225,720	+				+1.2
1,225,720	+				+2.7
1,225,720	+				-0.1
1,225,728	-				+1.7
1,225,734	+				-1.0
1,225,734	+				+0.4
1,225,734	+				-0.4
1,225,742	-				+0.4
1,225,742	-				+0.5
1,225,744	+				+0.2
1,225,776	-				-0.9
1,225,794	-				+0.2
1,225,820	+				+1.4
1,225,865	+	ycgJ	b1177	0.11	-0.3
1,225,865	+	ycgJ	b1177	0.11	+0.1
1,225,865	+	ycgJ	b1177	0.11	-0.8
1,225,893	-	ycgJ	b1177	0.19	-1.0
1,225,916	-	ycgJ	b1177	0.25	-0.6
1,225,916	-	ycgJ	b1177	0.25	-0.0
1,226,030	+	ycgJ	b1177	0.56	-0.2
1,226,037	+	ycgJ	b1177	0.58	+0.0
1,226,037	+	ycgJ	b1177	0.58	+0.6
1,226,217	-				-2.6
1,226,219	+				-0.4
1,226,219	+				-0.1
1,226,232	+				-1.6
1,226,234	+				-0.2
1,226,237	+				-0.1
1,226,237	+				-0.7
1,226,240	+				-0.2
1,226,240	+				+0.1
1,226,240	+				-1.2
1,226,240	+				+0.4
1,226,240	-				-0.2
1,226,243	-				-0.1
1,226,243	-				+0.0
1,226,244	+				+0.2
1,226,248	-				-1.1
1,226,276	+				+2.0
1,226,284	-				+1.0
1,226,284	-				+1.0