Strain Fitness in Escherichia coli BW25113 around b1143
Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 2 mM |
---|---|---|---|---|---|
remove | |||||
1,199,736 | - | intE | b1140 | 0.74 | -0.5 |
1,199,742 | + | intE | b1140 | 0.74 | -0.2 |
1,199,742 | + | intE | b1140 | 0.74 | -0.2 |
1,199,870 | - | intE | b1140 | 0.86 | +1.1 |
1,199,943 | - | +0.4 | |||
1,199,943 | - | -0.1 | |||
1,200,021 | + | +0.2 | |||
1,200,088 | + | ymfG | b1141 | 0.32 | -0.9 |
1,200,127 | - | ymfG | b1141 | 0.48 | +0.6 |
1,200,191 | - | ymfG | b1141 | 0.74 | +0.5 |
1,200,236 | + | +0.4 | |||
1,200,278 | - | -1.9 | |||
1,200,298 | + | -0.2 | |||
1,200,340 | - | +1.0 | |||
1,200,347 | + | -0.4 | |||
1,200,360 | - | -0.4 | |||
1,200,368 | - | +0.8 | |||
1,200,404 | - | -0.0 | |||
1,200,475 | - | +0.4 | |||
1,200,475 | - | -0.3 | |||
1,200,482 | + | +0.6 | |||
1,200,683 | - | -0.7 | |||
1,200,770 | - | ymfI | b1143 | 0.15 | -1.9 |
1,200,919 | + | ymfI | b1143 | 0.58 | +0.4 |
1,201,109 | - | ymfJ | b1144 | 0.36 | -0.0 |
1,201,127 | + | ymfJ | b1144 | 0.41 | -0.6 |
1,201,127 | + | ymfJ | b1144 | 0.41 | -0.2 |
Or see this region's nucleotide sequence