Strain Fitness in Escherichia coli BW25113 around b0948

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
1,006,113	+	ycbX	b0947	0.36	-0.0
1,006,113	+	ycbX	b0947	0.36	+0.8
1,006,191	-	ycbX	b0947	0.43	+0.5
1,006,274	-	ycbX	b0947	0.50	+0.6
1,006,280	-	ycbX	b0947	0.51	-0.5
1,006,280	-	ycbX	b0947	0.51	-0.8
1,006,309	-	ycbX	b0947	0.54	+0.2
1,006,402	+	ycbX	b0947	0.62	-0.9
1,006,610	-	ycbX	b0947	0.81	+1.0
1,006,648	+	ycbX	b0947	0.84	-0.1
1,006,731	+				-0.1
1,006,731	+				+0.5
1,006,820	+				-0.2
1,006,962	-				-0.7
1,006,980	-				+0.4
1,006,980	-				-0.5
1,006,983	-				-0.5
1,007,045	-				-0.2
1,007,084	-				-0.7
1,007,092	+				-0.9
1,007,234	-				+1.1
1,007,282	+	ycbY	b0948	0.10	+0.8
1,007,387	-	ycbY	b0948	0.15	+0.2
1,007,387	-	ycbY	b0948	0.15	-0.9
1,007,481	+	ycbY	b0948	0.20	-0.2
1,007,481	+	ycbY	b0948	0.20	-0.1
1,007,920	+	ycbY	b0948	0.40	+1.3
1,007,920	+	ycbY	b0948	0.40	-0.1
1,007,985	-	ycbY	b0948	0.44	+0.5
1,007,990	-	ycbY	b0948	0.44	-0.7
1,008,048	-	ycbY	b0948	0.47	-0.0
1,008,158	-	ycbY	b0948	0.52	-0.3
1,008,248	-	ycbY	b0948	0.56	+0.1
1,008,248	-	ycbY	b0948	0.56	+1.5
1,008,322	-	ycbY	b0948	0.60	-0.1
1,008,322	-	ycbY	b0948	0.60	-0.5
1,008,446	-	ycbY	b0948	0.65	-0.2
1,008,573	-	ycbY	b0948	0.71	+0.5
1,008,573	-	ycbY	b0948	0.71	-0.1
1,008,588	+	ycbY	b0948	0.72	+0.5
1,008,588	+	ycbY	b0948	0.72	-0.1
1,008,593	+	ycbY	b0948	0.72	-0.5
1,008,622	+	ycbY	b0948	0.74	+0.8
1,008,679	-	ycbY	b0948	0.76	+1.1
1,008,735	+	ycbY	b0948	0.79	-1.1
1,008,749	+	ycbY	b0948	0.80	-0.1
1,008,749	+	ycbY	b0948	0.80	+0.5
1,008,757	-	ycbY	b0948	0.80	-0.4
1,008,757	-	ycbY	b0948	0.80	-0.6
1,008,778	-	ycbY	b0948	0.81	+1.1
1,008,849	-	ycbY	b0948	0.84	+0.5
1,009,006	+				-0.7
1,009,048	+				-2.3
1,009,048	+				+1.1
1,009,159	-				-1.6
1,009,159	-				+0.8
1,009,178	-				+0.5
1,009,178	-				-1.1
1,009,256	-				+0.2
1,009,256	-				-1.5
1,009,560	-	uup	b0949	0.20	-1.2
1,009,560	-	uup	b0949	0.20	-1.8
1,009,581	-	uup	b0949	0.21	-0.4
1,009,581	-	uup	b0949	0.21	-0.3
1,009,648	+	uup	b0949	0.24	-0.7
1,009,699	+	uup	b0949	0.27	-0.5
1,009,699	+	uup	b0949	0.27	-1.7
1,009,707	-	uup	b0949	0.27	-0.1
1,009,772	+	uup	b0949	0.31	-0.8
1,009,814	+	uup	b0949	0.33	-1.5
1,009,814	+	uup	b0949	0.33	-0.5
1,009,839	+	uup	b0949	0.34	-1.2
1,009,839	+	uup	b0949	0.34	-0.2
1,009,904	-	uup	b0949	0.38	-0.8
1,009,996	-	uup	b0949	0.42	-2.1
1,010,004	+	uup	b0949	0.43	-0.8
1,010,156	-	uup	b0949	0.51	+0.5