Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4227

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
5,065,785	+		Echvi_4225	0.89	-0.3
5,065,862	-				-0.3
5,065,911	+				+0.5
5,065,911	+				+0.5
5,065,911	+				-0.1
5,065,913	+				-0.3
5,065,913	+				-0.1
5,065,913	+				+1.0
5,065,913	+				+0.4
5,065,913	+				-0.7
5,065,956	+				+0.3
5,065,956	+				+0.4
5,065,974	-				-1.6
5,065,997	+				+1.1
5,066,199	+				-0.3
5,066,200	-				+0.4
5,066,374	+				+0.2
5,066,402	-				-1.1
5,066,432	-				-0.7
5,066,432	-				-0.9
5,066,465	+				-0.1
5,066,465	+				-1.9
5,066,465	+				-0.6
5,066,490	+				-1.0
5,066,490	+				-0.2
5,066,491	-				-0.0
5,066,495	-				-0.1
5,066,580	-		Echvi_4226	0.44	+0.8
5,066,648	-		Echvi_4226	0.78	-0.7
5,066,705	+				-0.6
5,066,706	-				+4.4
5,066,738	+				+2.2
5,066,738	+				-1.7
5,066,739	-				-0.4
5,067,101	+		Echvi_4227	0.30	+0.2
5,067,224	+		Echvi_4227	0.38	+1.3
5,067,242	+		Echvi_4227	0.39	+0.3
5,067,243	-		Echvi_4227	0.39	+0.5
5,067,318	-		Echvi_4227	0.44	-0.7
5,067,373	-		Echvi_4227	0.48	+1.0
5,067,379	+		Echvi_4227	0.48	+0.4
5,067,452	+		Echvi_4227	0.53	-0.9
5,067,502	+		Echvi_4227	0.57	-0.0
5,067,574	-		Echvi_4227	0.61	-0.1
5,067,582	-		Echvi_4227	0.62	-0.4
5,067,583	+		Echvi_4227	0.62	+1.0
5,067,583	+		Echvi_4227	0.62	-0.6
5,067,860	+		Echvi_4227	0.81	-0.5
5,067,931	+		Echvi_4227	0.85	+0.4
5,067,932	-		Echvi_4227	0.86	-2.2
5,067,932	-		Echvi_4227	0.86	+0.9
5,067,949	-		Echvi_4227	0.87	-1.5
5,067,951	-		Echvi_4227	0.87	-1.2
5,067,951	-		Echvi_4227	0.87	+1.4
5,067,951	-		Echvi_4227	0.87	+0.1
5,067,951	-		Echvi_4227	0.87	+0.1
5,068,048	+				+0.4
5,068,054	+				+0.2
5,068,059	+				-0.7
5,068,132	-				-0.6
5,068,141	-				-1.2
5,068,215	+				+0.8
5,068,216	-				-0.4
5,068,262	+				-0.2
5,068,285	-				-0.2
5,068,298	-				-1.1
5,068,320	+				+0.5
5,068,321	-				-0.5
5,068,417	-				+0.6
5,068,462	-				-0.3
5,068,475	-				-1.0
5,068,571	-		Echvi_4228	0.13	-1.7
5,068,571	-		Echvi_4228	0.13	-0.4
5,068,732	+		Echvi_4228	0.18	-0.4
5,068,732	+		Echvi_4228	0.18	-0.2
5,068,732	+		Echvi_4228	0.18	+2.9
5,068,733	-		Echvi_4228	0.18	+0.6
5,068,733	-		Echvi_4228	0.18	+1.6
5,068,747	-		Echvi_4228	0.19	-0.1
5,068,826	+		Echvi_4228	0.21	+0.1
5,068,832	-		Echvi_4228	0.21	-0.3
5,068,832	-		Echvi_4228	0.21	-0.5
5,068,834	+		Echvi_4228	0.21	-0.3
5,068,834	+		Echvi_4228	0.21	+0.1
5,068,834	+		Echvi_4228	0.21	+0.8
5,068,834	+		Echvi_4228	0.21	+1.5
5,068,834	+		Echvi_4228	0.21	+0.0
5,068,835	-		Echvi_4228	0.21	-0.0
5,068,836	+		Echvi_4228	0.21	+0.6
5,068,836	+		Echvi_4228	0.21	+0.1
5,068,837	-		Echvi_4228	0.21	+1.6
5,068,837	-		Echvi_4228	0.21	-0.7
5,069,002	+		Echvi_4228	0.27	-2.4
5,069,002	+		Echvi_4228	0.27	+0.8
5,069,003	-		Echvi_4228	0.27	+0.0
5,069,004	+		Echvi_4228	0.27	-0.6
5,069,004	+		Echvi_4228	0.27	+0.6
5,069,061	+		Echvi_4228	0.29	-0.2
5,069,061	+		Echvi_4228	0.29	+1.1
5,069,062	-		Echvi_4228	0.29	+0.3
5,069,062	-		Echvi_4228	0.29	+0.7
5,069,064	+		Echvi_4228	0.29	+0.6
5,069,065	-		Echvi_4228	0.29	+0.0
5,069,143	+		Echvi_4228	0.31	+0.6
5,069,144	-		Echvi_4228	0.31	-0.0
5,069,144	-		Echvi_4228	0.31	-0.7