Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3971

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,758,253	+				-0.7
4,758,274	+				-1.0
4,758,413	+				+1.6
4,758,443	+				-0.4
4,758,512	+				+0.7
4,758,536	+				-0.7
4,758,546	+				-0.4
4,758,549	+				+0.1
4,758,550	-				-0.4
4,758,653	-				-1.1
4,758,661	+				-1.0
4,758,661	+				+0.2
4,758,661	+				+1.0
4,758,662	-				-0.2
4,758,754	+		Echvi_3970	0.23	+1.0
4,758,867	+		Echvi_3970	0.44	+0.7
4,758,894	+		Echvi_3970	0.49	+1.2
4,758,894	+		Echvi_3970	0.49	+1.6
4,758,894	+		Echvi_3970	0.49	-0.6
4,758,895	-		Echvi_3970	0.49	-0.3
4,758,897	-		Echvi_3970	0.50	-0.3
4,758,897	-		Echvi_3970	0.50	-0.0
4,758,905	+		Echvi_3970	0.51	+0.4
4,758,905	+		Echvi_3970	0.51	-0.2
4,758,905	+		Echvi_3970	0.51	-0.4
4,758,905	+		Echvi_3970	0.51	+3.1
4,758,906	-		Echvi_3970	0.51	-0.4
4,758,906	-		Echvi_3970	0.51	-2.1
4,758,912	-		Echvi_3970	0.53	-1.6
4,758,927	+		Echvi_3970	0.55	-0.0
4,758,927	+		Echvi_3970	0.55	+0.3
4,758,927	+		Echvi_3970	0.55	+4.4
4,758,927	+		Echvi_3970	0.55	+0.5
4,758,927	+		Echvi_3970	0.55	-0.6
4,758,927	+		Echvi_3970	0.55	-0.8
4,758,928	-		Echvi_3970	0.56	+1.0
4,758,928	-		Echvi_3970	0.56	-0.7
4,758,928	-		Echvi_3970	0.56	-0.8
4,758,929	+		Echvi_3970	0.56	+0.0
4,758,929	+		Echvi_3970	0.56	-0.1
4,758,929	+		Echvi_3970	0.56	-0.4
4,758,930	-		Echvi_3970	0.56	+1.6
4,758,957	-		Echvi_3970	0.61	+0.4
4,758,958	+		Echvi_3970	0.61	+0.2
4,758,959	-		Echvi_3970	0.61	+0.0
4,758,959	-		Echvi_3970	0.61	-0.7
4,758,959	-		Echvi_3970	0.61	+1.0
4,758,959	-		Echvi_3970	0.61	+0.5
4,758,967	+		Echvi_3970	0.63	-0.0
4,758,986	-		Echvi_3970	0.66	+0.2
4,758,986	-		Echvi_3970	0.66	-0.3
4,759,068	-		Echvi_3970	0.82	-0.3
4,759,086	-		Echvi_3970	0.85	-0.4
4,759,262	-				-0.7
4,759,262	-				+0.6
4,759,270	-				-0.1
4,759,324	+		Echvi_3971	0.10	+0.6
4,759,325	-		Echvi_3971	0.10	-0.3
4,759,383	-		Echvi_3971	0.18	-0.6
4,759,411	+		Echvi_3971	0.21	-0.5
4,759,411	+		Echvi_3971	0.21	-0.3
4,759,411	+		Echvi_3971	0.21	+0.9
4,759,413	+		Echvi_3971	0.22	+0.1
4,759,413	+		Echvi_3971	0.22	+1.3
4,759,413	+		Echvi_3971	0.22	+0.1
4,759,413	+		Echvi_3971	0.22	+0.1
4,759,413	+		Echvi_3971	0.22	+0.6
4,759,413	+		Echvi_3971	0.22	+0.3
4,759,413	+		Echvi_3971	0.22	-0.0
4,759,413	+		Echvi_3971	0.22	+0.8
4,759,413	+		Echvi_3971	0.22	+0.9
4,759,413	-		Echvi_3971	0.22	-0.6
4,759,414	-		Echvi_3971	0.22	-0.1
4,759,414	-		Echvi_3971	0.22	+0.2
4,759,414	-		Echvi_3971	0.22	-0.3
4,759,414	-		Echvi_3971	0.22	-0.7
4,759,414	-		Echvi_3971	0.22	+1.0
4,759,414	-		Echvi_3971	0.22	-1.4
4,759,414	-		Echvi_3971	0.22	-0.1
4,759,461	+		Echvi_3971	0.28	+0.3
4,759,462	-		Echvi_3971	0.28	-1.1
4,759,462	-		Echvi_3971	0.28	+1.2
4,759,462	-		Echvi_3971	0.28	+0.3
4,759,462	-		Echvi_3971	0.28	-0.0
4,759,462	-		Echvi_3971	0.28	-0.2
4,759,466	-		Echvi_3971	0.29	+2.2
4,759,466	-		Echvi_3971	0.29	+1.9
4,759,477	+		Echvi_3971	0.30	+1.0
4,759,479	+		Echvi_3971	0.30	-0.9
4,759,480	-		Echvi_3971	0.30	+0.2
4,759,480	-		Echvi_3971	0.30	+0.1
4,759,486	+		Echvi_3971	0.31	+0.6
4,759,486	+		Echvi_3971	0.31	+1.7
4,759,486	+		Echvi_3971	0.31	+4.1
4,759,486	+		Echvi_3971	0.31	+0.9
4,759,487	-		Echvi_3971	0.31	+2.1
4,759,501	+		Echvi_3971	0.33	-0.5
4,759,504	+		Echvi_3971	0.33	+0.1
4,759,505	-		Echvi_3971	0.34	-1.2
4,759,512	+		Echvi_3971	0.35	+0.0
4,759,513	-		Echvi_3971	0.35	+0.1
4,759,549	+		Echvi_3971	0.39	+1.2
4,759,550	-		Echvi_3971	0.39	+1.1
4,759,550	-		Echvi_3971	0.39	+1.0
4,759,551	+		Echvi_3971	0.40	+1.1
4,759,551	+		Echvi_3971	0.40	+0.4
4,759,551	+		Echvi_3971	0.40	-0.2
4,759,551	+		Echvi_3971	0.40	-0.1
4,759,551	+		Echvi_3971	0.40	-0.7
4,759,551	+		Echvi_3971	0.40	+1.0
4,759,552	-		Echvi_3971	0.40	-1.0
4,759,552	-		Echvi_3971	0.40	-0.8
4,759,552	-		Echvi_3971	0.40	+1.1
4,759,552	-		Echvi_3971	0.40	+0.3
4,759,591	+		Echvi_3971	0.45	+1.2
4,759,591	+		Echvi_3971	0.45	-0.3
4,759,591	+		Echvi_3971	0.45	+0.5
4,759,591	+		Echvi_3971	0.45	+1.3
4,759,592	-		Echvi_3971	0.45	-1.0
4,759,592	-		Echvi_3971	0.45	+0.2
4,759,592	-		Echvi_3971	0.45	-0.1
4,759,620	+		Echvi_3971	0.49	-0.1
4,759,620	+		Echvi_3971	0.49	+0.4
4,759,621	-		Echvi_3971	0.49	+0.9
4,759,621	-		Echvi_3971	0.49	+0.3
4,759,637	+		Echvi_3971	0.51	+0.7
4,759,674	+		Echvi_3971	0.56	+0.0
4,759,866	-		Echvi_3971	0.81	-1.1
4,759,868	+		Echvi_3971	0.81	+0.6
4,759,868	+		Echvi_3971	0.81	+0.8
4,759,889	-		Echvi_3971	0.84	-1.3
4,759,911	+		Echvi_3971	0.86	+0.3
4,759,941	-				+0.6
4,759,953	-				-0.1
4,759,953	-				-0.5
4,759,985	+				+1.1
4,759,986	-				+0.4
4,759,986	-				-0.6
4,759,989	+				+2.1
4,760,007	-				-0.8
4,760,029	-				+1.4
4,760,035	+				+1.1
4,760,035	+				+1.6
4,760,036	-				-0.6
4,760,036	-				+0.1
4,760,036	-				+1.6
4,760,037	+				+1.3
4,760,037	+				+1.4
4,760,090	+		Echvi_3972	0.24	+1.9
4,760,181	+		Echvi_3972	0.60	+1.4
4,760,222	+		Echvi_3972	0.76	+2.3
4,760,255	+		Echvi_3972	0.88	+1.7
4,760,256	-		Echvi_3972	0.89	-1.4
4,760,285	-				+0.6
4,760,291	+				+1.6
4,760,291	+				+2.8
4,760,291	+				+2.2
4,760,292	-				+0.2
4,760,299	+				+2.2
4,760,300	-				-0.1
4,760,300	-				-0.2
4,760,300	-				-1.0
4,760,300	-				+0.2
4,760,300	-				+1.8
4,760,300	-				-0.1
4,760,300	-				-0.0
4,760,303	-				+0.2
4,760,437	+		Echvi_3973	0.41	+2.7
4,760,438	-		Echvi_3973	0.42	+0.7
4,760,463	-		Echvi_3973	0.60	+0.1
4,760,470	+		Echvi_3973	0.65	+2.6
4,760,470	+		Echvi_3973	0.65	+2.4
4,760,470	+		Echvi_3973	0.65	+2.1
4,760,470	+		Echvi_3973	0.65	+1.9
4,760,471	-		Echvi_3973	0.65	-0.2
4,760,471	-		Echvi_3973	0.65	+1.1
4,760,471	-		Echvi_3973	0.65	+0.6
4,760,471	-		Echvi_3973	0.65	+0.6
4,760,471	-		Echvi_3973	0.65	-1.2
4,760,523	+				+2.5
4,760,555	-				-1.3
4,760,555	-				-1.3
4,760,555	-				+1.1
4,760,557	+				-0.0
4,760,573	+				-1.0
4,760,586	-				-0.8
4,760,586	-				-2.0
4,760,589	+				-1.9
4,760,590	-				-1.0
4,760,608	+				-1.0
4,760,626	+				-0.4
4,760,626	+				-2.3
4,760,739	+				-1.3
4,760,739	+				-0.0
4,760,739	+				-0.2
4,760,793	+				-0.4
4,760,793	+				-1.2
4,760,793	+				-1.7
4,760,794	-				-0.0
4,761,003	-		Echvi_3974	0.18	-1.7
4,761,007	+		Echvi_3974	0.19	-1.2