Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3953

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,737,272	+		Echvi_3952	0.37	-0.5
4,737,295	+		Echvi_3952	0.39	-2.3
4,737,431	+		Echvi_3952	0.49	-0.4
4,737,567	+		Echvi_3952	0.58	-0.6
4,737,943	+		Echvi_3952	0.84	-2.2
4,737,947	+		Echvi_3952	0.84	-0.6
4,737,947	+		Echvi_3952	0.84	-0.3
4,738,119	+				-0.7
4,738,153	+				-0.2
4,738,158	+				-1.1
4,738,162	+				-0.0
4,738,172	+				-0.4
4,738,172	+				-0.6
4,738,174	+				-1.2
4,738,195	+				+1.0
4,738,258	+				-0.9
4,738,293	+		Echvi_3953	0.13	-1.5
4,738,328	+		Echvi_3953	0.17	-0.1
4,738,328	+		Echvi_3953	0.17	+0.8
4,738,328	+		Echvi_3953	0.17	-1.5
4,738,329	-		Echvi_3953	0.17	-0.0
4,738,329	-		Echvi_3953	0.17	-1.6
4,738,407	+		Echvi_3953	0.26	-0.7
4,738,655	+		Echvi_3953	0.53	-0.6
4,738,655	+		Echvi_3953	0.53	-1.3
4,738,655	+		Echvi_3953	0.53	-0.9
4,738,655	+		Echvi_3953	0.53	+0.8
4,738,655	+		Echvi_3953	0.53	-0.0
4,738,655	+		Echvi_3953	0.53	+0.7
4,738,656	-		Echvi_3953	0.53	-0.6
4,738,656	-		Echvi_3953	0.53	-0.2
4,738,656	-		Echvi_3953	0.53	-1.1
4,738,682	+		Echvi_3953	0.56	+0.2
4,738,683	-		Echvi_3953	0.56	-0.6
4,738,731	+		Echvi_3953	0.61	+0.6
4,738,821	-		Echvi_3953	0.71	+1.5
4,738,824	+		Echvi_3953	0.72	-1.4
4,738,984	+		Echvi_3953	0.89	-0.8
4,739,001	+				-0.2
4,739,018	+				-0.3
4,739,019	-				-0.5
4,739,019	-				+0.2
4,739,082	+				-0.4
4,739,091	-				-1.3
4,739,155	-				-0.6
4,739,161	-				+0.5
4,739,165	+				+0.0
4,739,165	+				+0.3
4,739,198	+				-0.2
4,739,199	-				-2.5
4,739,209	+				+0.0
4,739,210	-				-1.8
4,739,210	-				-0.3
4,739,214	+				-0.2
4,739,214	+				-0.4
4,739,214	+				+1.5
4,739,215	-				+0.4
4,739,215	-				-0.6
4,739,215	-				+1.5
4,739,215	-				-1.2
4,739,227	+				+0.4
4,739,237	-				+0.5
4,739,257	+				-0.0
4,739,545	+				+0.3
4,739,545	+				-0.9
4,739,612	-		Echvi_3954	0.15	-2.3
4,739,614	-		Echvi_3954	0.15	+1.0
4,739,635	-		Echvi_3954	0.17	-0.1
4,739,730	-		Echvi_3954	0.24	-0.4
4,739,805	+		Echvi_3954	0.30	-0.6
4,739,820	+		Echvi_3954	0.31	+1.5
4,739,841	+		Echvi_3954	0.32	+1.8
4,739,841	+		Echvi_3954	0.32	-0.3
4,739,911	-		Echvi_3954	0.38	+1.8
4,739,911	-		Echvi_3954	0.38	-2.4
4,739,922	-		Echvi_3954	0.39	+0.9
4,739,949	-		Echvi_3954	0.41	-1.0