Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3844

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,594,682	-				-0.2
4,594,695	-				+0.5
4,594,701	-				-0.5
4,594,748	+		Echvi_3842	0.18	-0.2
4,594,780	+		Echvi_3842	0.26	+0.9
4,594,781	-		Echvi_3842	0.27	+0.2
4,594,832	-		Echvi_3842	0.40	-1.9
4,594,875	+		Echvi_3842	0.51	-0.2
4,594,890	+		Echvi_3842	0.55	-0.3
4,594,890	+		Echvi_3842	0.55	-0.2
4,594,891	-		Echvi_3842	0.55	+1.5
4,594,891	-		Echvi_3842	0.55	-1.5
4,594,897	+		Echvi_3842	0.57	-0.8
4,595,009	+		Echvi_3842	0.86	+0.3
4,595,010	-		Echvi_3842	0.87	+0.4
4,595,010	-		Echvi_3842	0.87	-0.2
4,595,010	-		Echvi_3842	0.87	-0.3
4,595,010	-		Echvi_3842	0.87	-0.0
4,595,024	+				-0.3
4,595,036	-				+0.4
4,595,109	-				+0.4
4,595,115	+				-0.7
4,595,115	+				+0.4
4,595,115	+				-1.3
4,595,115	+				+0.3
4,595,115	+				-0.9
4,595,115	+				-1.5
4,595,115	+				-0.1
4,595,116	-				-0.7
4,595,116	-				+2.3
4,595,116	-				+1.2
4,595,116	-				-0.2
4,595,116	-				-0.6
4,595,116	-				-0.2
4,595,116	-				-1.1
4,595,116	-				+0.8
4,595,145	-				-1.1
4,595,155	-				+0.8
4,595,155	-				-0.3
4,595,159	+				+0.1
4,595,175	-				-0.6
4,595,197	+				-1.4
4,595,306	-				-0.3
4,595,308	+				+1.5
4,595,324	-				+0.4
4,595,367	+				+0.1
4,595,375	+				+0.2
4,595,674	+		Echvi_3844	0.57	-2.2
4,595,674	+		Echvi_3844	0.57	-1.5
4,595,674	+		Echvi_3844	0.57	+0.4
4,595,674	+		Echvi_3844	0.57	-0.6
4,595,675	-		Echvi_3844	0.57	+0.5
4,595,675	-		Echvi_3844	0.57	-0.8
4,595,723	+				-1.7
4,595,733	+				-0.4
4,595,734	-				-0.7
4,595,734	-				-0.3
4,595,734	-				+0.2
4,595,736	-				+0.2
4,595,736	-				-0.3
4,595,738	+				-1.2
4,595,738	+				+0.5
4,595,739	-				-1.1
4,595,739	-				+0.0
4,595,739	-				-0.1
4,595,751	-				-0.3
4,595,751	-				-0.4
4,595,775	-				+0.3
4,595,790	+				-0.6
4,595,790	+				-2.5
4,595,792	+				-1.4
4,595,793	-				-0.1
4,595,799	+				-0.3
4,595,800	-				+1.5
4,595,810	+				-0.2
4,595,858	+				-0.7
4,595,862	+				-0.8
4,595,869	+				-1.3
4,595,918	-				+1.2
4,596,000	-		Echvi_3845	0.19	+0.5
4,596,000	-		Echvi_3845	0.19	+1.2
4,596,074	+		Echvi_3845	0.30	-2.0
4,596,075	-		Echvi_3845	0.30	+0.4
4,596,075	-		Echvi_3845	0.30	-0.3
4,596,076	+		Echvi_3845	0.31	+0.1
4,596,077	-		Echvi_3845	0.31	+0.3
4,596,077	-		Echvi_3845	0.31	+0.1
4,596,121	+		Echvi_3845	0.37	+0.5
4,596,121	+		Echvi_3845	0.37	-0.5
4,596,127	-		Echvi_3845	0.38	+0.8
4,596,182	-		Echvi_3845	0.46	+0.1
4,596,182	-		Echvi_3845	0.46	+0.3
4,596,270	-		Echvi_3845	0.59	+0.8
4,596,270	-		Echvi_3845	0.59	-1.3
4,596,285	-		Echvi_3845	0.61	+0.3
4,596,342	-		Echvi_3845	0.70	-0.8
4,596,352	-		Echvi_3845	0.71	+1.1
4,596,478	-				-0.3
4,596,538	-				-0.2
4,596,538	-				-0.3
4,596,541	-				+0.2
4,596,542	+				+1.2
4,596,542	+				+0.5
4,596,542	+				+0.0
4,596,543	-				+0.6
4,596,547	+				-1.4
4,596,632	+				-0.3
4,596,658	+				+0.2