Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3752

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,471,266	-		Echvi_3751	0.43	+0.2
4,471,353	+		Echvi_3751	0.49	+0.9
4,471,353	+		Echvi_3751	0.49	+0.1
4,471,354	-		Echvi_3751	0.49	+0.8
4,471,369	+		Echvi_3751	0.50	+0.5
4,471,370	-		Echvi_3751	0.50	-0.2
4,471,407	-		Echvi_3751	0.52	-0.6
4,471,486	+		Echvi_3751	0.57	+1.0
4,471,631	-		Echvi_3751	0.65	+0.5
4,471,649	+		Echvi_3751	0.66	-0.4
4,471,709	+		Echvi_3751	0.70	-1.8
4,471,709	+		Echvi_3751	0.70	-0.9
4,471,710	-		Echvi_3751	0.70	-0.5
4,471,775	+		Echvi_3751	0.74	-0.0
4,471,859	+		Echvi_3751	0.79	-0.2
4,471,860	-		Echvi_3751	0.79	+0.1
4,471,929	-		Echvi_3751	0.83	-0.8
4,472,009	+		Echvi_3751	0.88	-0.6
4,472,009	+		Echvi_3751	0.88	+0.5
4,472,009	+		Echvi_3751	0.88	+0.4
4,472,016	-		Echvi_3751	0.88	+0.5
4,472,028	+		Echvi_3751	0.89	-0.7
4,472,028	+		Echvi_3751	0.89	-0.6
4,472,029	-		Echvi_3751	0.89	+0.3
4,472,033	+		Echvi_3751	0.89	+0.3
4,472,033	+		Echvi_3751	0.89	+1.9
4,472,033	+		Echvi_3751	0.89	-0.1
4,472,034	-		Echvi_3751	0.90	+0.2
4,472,038	+		Echvi_3751	0.90	+0.7
4,472,039	-		Echvi_3751	0.90	-0.5
4,472,040	+		Echvi_3751	0.90	-0.2
4,472,061	+				+0.2
4,472,320	+				+1.5
4,472,331	+				+0.3
4,472,332	-				+0.1
4,472,352	+				+1.8
4,472,352	+				-0.2
4,472,361	+				+0.5
4,472,454	+				-0.4
4,472,454	+				-1.2
4,472,459	+				-0.3
4,472,459	+				+0.5
4,472,459	+				-0.2
4,472,459	+				-0.8
4,472,459	+				-0.8
4,472,460	-				+0.1
4,472,460	-				+0.8
4,472,480	+				-0.0
4,472,480	+				-0.2
4,472,480	+				-0.0
4,472,480	+				-0.0
4,472,480	+				-0.0
4,472,481	-				+1.5
4,472,481	-				+0.8
4,472,484	+				-0.7
4,472,485	-				+0.3
4,472,506	+				-0.8
4,472,507	-				+0.4
4,472,639	+		Echvi_3752	0.13	+0.1
4,472,640	-		Echvi_3752	0.13	-1.0
4,472,662	+		Echvi_3752	0.14	+3.1
4,472,674	+		Echvi_3752	0.14	+0.8
4,472,674	+		Echvi_3752	0.14	+0.4
4,472,678	-		Echvi_3752	0.14	+0.2
4,472,692	-		Echvi_3752	0.15	+0.9
4,472,695	+		Echvi_3752	0.15	+0.2
4,472,695	+		Echvi_3752	0.15	-0.4
4,472,695	+		Echvi_3752	0.15	-0.1
4,472,696	-		Echvi_3752	0.15	+0.9
4,472,729	+		Echvi_3752	0.16	+0.3
4,472,729	+		Echvi_3752	0.16	-0.5
4,472,730	-		Echvi_3752	0.16	-1.3
4,472,730	-		Echvi_3752	0.16	+1.1
4,472,730	-		Echvi_3752	0.16	+1.1
4,472,730	-		Echvi_3752	0.16	+0.0
4,472,731	+		Echvi_3752	0.16	+0.5
4,472,731	+		Echvi_3752	0.16	+1.2
4,472,751	+		Echvi_3752	0.17	+1.0
4,472,854	-		Echvi_3752	0.20	+0.3
4,472,857	+		Echvi_3752	0.20	-0.7
4,472,857	+		Echvi_3752	0.20	-0.3
4,472,857	+		Echvi_3752	0.20	+1.4
4,472,857	+		Echvi_3752	0.20	-0.0
4,472,857	+		Echvi_3752	0.20	-0.7
4,472,857	+		Echvi_3752	0.20	+1.2
4,472,858	-		Echvi_3752	0.20	+1.0
4,472,876	-		Echvi_3752	0.21	+1.5
4,472,876	-		Echvi_3752	0.21	-0.3
4,472,911	+		Echvi_3752	0.22	-0.7
4,472,912	-		Echvi_3752	0.22	+0.4
4,472,967	+		Echvi_3752	0.23	-1.2
4,472,968	-		Echvi_3752	0.23	+1.8
4,472,968	-		Echvi_3752	0.23	-0.5
4,472,968	-		Echvi_3752	0.23	-1.0
4,472,979	+		Echvi_3752	0.24	-0.3
4,472,979	+		Echvi_3752	0.24	-0.5
4,473,034	-		Echvi_3752	0.26	-0.6
4,473,034	-		Echvi_3752	0.26	-0.6
4,473,092	-		Echvi_3752	0.27	-1.3
4,473,092	-		Echvi_3752	0.27	+2.0
4,473,106	+		Echvi_3752	0.28	-3.0
4,473,133	+		Echvi_3752	0.29	-1.1
4,473,134	-		Echvi_3752	0.29	+0.9
4,473,197	+		Echvi_3752	0.31	-1.5
4,473,197	+		Echvi_3752	0.31	+1.0
4,473,198	-		Echvi_3752	0.31	-0.5
4,473,247	-		Echvi_3752	0.32	+0.3
4,473,247	-		Echvi_3752	0.32	-0.9
4,473,295	-		Echvi_3752	0.34	+0.2
4,473,314	+		Echvi_3752	0.34	-1.3
4,473,314	+		Echvi_3752	0.34	-1.5
4,473,353	-		Echvi_3752	0.36	-1.0
4,473,456	+		Echvi_3752	0.39	-0.5
4,473,456	+		Echvi_3752	0.39	+1.2
4,473,456	+		Echvi_3752	0.39	+2.1
4,473,457	-		Echvi_3752	0.39	+1.4
4,473,457	-		Echvi_3752	0.39	+1.5
4,473,558	-		Echvi_3752	0.42	-1.8
4,473,654	+		Echvi_3752	0.45	+1.0
4,473,654	+		Echvi_3752	0.45	-1.0
4,473,654	+		Echvi_3752	0.45	+1.1
4,473,655	-		Echvi_3752	0.45	+1.0
4,473,655	-		Echvi_3752	0.45	+0.9
4,473,655	-		Echvi_3752	0.45	+0.2
4,473,666	+		Echvi_3752	0.46	+0.9
4,473,666	+		Echvi_3752	0.46	-0.4
4,473,667	-		Echvi_3752	0.46	+1.5
4,473,672	+		Echvi_3752	0.46	-0.3
4,473,800	+		Echvi_3752	0.50	-0.3
4,473,860	-		Echvi_3752	0.52	+0.8
4,473,877	+		Echvi_3752	0.52	-0.0
4,473,878	-		Echvi_3752	0.52	-1.9
4,473,878	-		Echvi_3752	0.52	-0.6
4,473,879	+		Echvi_3752	0.52	+0.5
4,473,880	-		Echvi_3752	0.52	+0.7
4,473,969	+		Echvi_3752	0.55	+0.5
4,473,973	+		Echvi_3752	0.55	+0.8
4,473,973	+		Echvi_3752	0.55	+0.5
4,473,974	-		Echvi_3752	0.55	+0.2
4,473,974	-		Echvi_3752	0.55	-0.2
4,474,007	-		Echvi_3752	0.56	+0.3
4,474,027	+		Echvi_3752	0.57	-0.1
4,474,092	+		Echvi_3752	0.59	+1.5
4,474,092	+		Echvi_3752	0.59	+1.2
4,474,230	+		Echvi_3752	0.63	+1.0
4,474,231	-		Echvi_3752	0.63	-0.5
4,474,231	-		Echvi_3752	0.63	+0.3
4,474,300	+		Echvi_3752	0.66	+1.5
4,474,304	+		Echvi_3752	0.66	-0.6
4,474,410	+		Echvi_3752	0.69	-0.0
4,474,411	-		Echvi_3752	0.69	+1.0
4,474,411	-		Echvi_3752	0.69	+0.4
4,474,437	-		Echvi_3752	0.70	-0.5
4,474,437	-		Echvi_3752	0.70	+1.0
4,474,443	-		Echvi_3752	0.70	+0.2
4,474,447	+		Echvi_3752	0.70	+0.4
4,474,448	-		Echvi_3752	0.70	-0.5
4,474,448	-		Echvi_3752	0.70	-1.6
4,474,496	-		Echvi_3752	0.72	+0.7
4,474,509	-		Echvi_3752	0.72	-0.9
4,474,706	-		Echvi_3752	0.78	+0.0
4,474,720	-		Echvi_3752	0.79	-0.6
4,474,720	-		Echvi_3752	0.79	+0.2
4,474,795	+		Echvi_3752	0.81	-0.7
4,474,808	-		Echvi_3752	0.82	+1.5
4,474,815	+		Echvi_3752	0.82	-0.0
4,474,857	+		Echvi_3752	0.83	-0.5
4,474,858	-		Echvi_3752	0.83	+0.5
4,474,889	-		Echvi_3752	0.84	-0.2
4,474,901	-		Echvi_3752	0.85	-0.3
4,474,904	+		Echvi_3752	0.85	+0.2
4,474,905	-		Echvi_3752	0.85	+0.2
4,474,947	+		Echvi_3752	0.86	-0.2
4,474,947	+		Echvi_3752	0.86	+1.1
4,474,947	+		Echvi_3752	0.86	+0.7
4,474,948	-		Echvi_3752	0.86	+0.1
4,474,948	-		Echvi_3752	0.86	-0.1
4,474,948	-		Echvi_3752	0.86	-0.2
4,475,044	+		Echvi_3752	0.89	-2.0
4,475,044	+		Echvi_3752	0.89	+0.5
4,475,044	+		Echvi_3752	0.89	+1.2
4,475,119	+				+3.1
4,475,161	+				+1.5
4,475,162	-				-0.9
4,475,214	+				-0.2
4,475,214	+				+0.8
4,475,306	+				-0.2
4,475,386	+				-1.8
4,475,387	-				+1.2
4,475,390	+				-1.3
4,475,390	+				-0.3
4,475,390	+				-1.3
4,475,391	-				+0.1
4,475,391	-				-0.7
4,475,400	+				+0.4
4,475,401	-				-0.9
4,475,408	-				+0.6
4,475,412	+				+0.2
4,475,413	-				+1.0
4,475,489	+				-0.0
4,475,501	-		Echvi_3753	0.14	-0.1
4,475,512	+		Echvi_3753	0.20	-1.0
4,475,517	+		Echvi_3753	0.23	-0.2
4,475,526	-		Echvi_3753	0.28	-0.0
4,475,583	-		Echvi_3753	0.60	+0.2
4,475,594	-		Echvi_3753	0.66	-0.5
4,475,594	-		Echvi_3753	0.66	+0.6
4,475,635	+		Echvi_3753	0.89	+0.3
4,475,680	+				+0.2
4,475,681	-				+0.2
4,475,764	+				-0.2
4,475,764	+				+0.1
4,475,765	-				-0.5
4,475,765	-				+0.3
4,475,765	-				-0.6
4,475,766	+				-0.6
4,475,766	+				+1.2
4,475,786	+				+0.2
4,475,787	-				+0.9
4,475,829	+				+0.1
4,475,829	+				+0.0
4,475,829	+				-0.3
4,475,830	-				+0.4
4,475,830	-				-1.8
4,476,007	+				-2.5
4,476,007	+				-0.5
4,476,018	-				+2.7
4,476,045	-				-1.0
4,476,047	+				+0.3
4,476,048	-				-0.0
4,476,248	+				-0.1
4,476,249	-				+0.8