Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3704

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,409,855	+		Echvi_3702	0.67	-0.9
4,409,855	+		Echvi_3702	0.67	-1.4
4,409,986	+		Echvi_3702	0.80	-2.3
4,410,078	-				-0.6
4,410,078	-				-2.3
4,410,078	-				-0.9
4,410,093	+				-2.1
4,410,093	+				-1.7
4,410,097	+				-0.6
4,410,097	+				-1.4
4,410,098	-				-0.0
4,410,103	+				-2.2
4,410,168	+				-0.4
4,410,168	+				+0.7
4,410,168	+				-0.8
4,410,169	-				+0.5
4,410,169	-				-0.7
4,410,169	-				-0.1
4,410,169	-				+0.9
4,410,169	-				+0.4
4,410,169	-				-0.6
4,410,169	-				-0.4
4,410,169	-				-0.3
4,410,172	+				+0.2
4,410,178	+				+1.9
4,410,198	-				-0.5
4,410,208	+				+0.8
4,410,224	-				-2.7
4,410,523	-		Echvi_3703	0.50	+1.5
4,410,569	+		Echvi_3703	0.57	-0.8
4,410,570	-		Echvi_3703	0.57	-1.7
4,410,594	+		Echvi_3703	0.61	-1.4
4,410,594	+		Echvi_3703	0.61	-0.0
4,410,594	+		Echvi_3703	0.61	-3.4
4,410,594	+		Echvi_3703	0.61	-1.6
4,410,681	+		Echvi_3703	0.75	-2.1
4,410,805	+				-1.0
4,410,815	-				-3.1
4,410,848	+				-0.9
4,410,848	+				-3.0
4,410,922	+		Echvi_3704	0.14	-1.5
4,410,923	-		Echvi_3704	0.14	-2.7
4,410,928	-		Echvi_3704	0.15	-4.2
4,410,946	+		Echvi_3704	0.18	-0.0
4,410,946	+		Echvi_3704	0.18	-2.8
4,410,947	-		Echvi_3704	0.18	-2.6
4,410,947	-		Echvi_3704	0.18	-1.7
4,410,947	-		Echvi_3704	0.18	-1.0
4,410,947	-		Echvi_3704	0.18	-2.3
4,410,947	-		Echvi_3704	0.18	-0.8
4,410,947	-		Echvi_3704	0.18	-2.0
4,411,377	+		Echvi_3704	0.82	-0.8
4,411,377	+		Echvi_3704	0.82	-2.4
4,411,377	+		Echvi_3704	0.82	-2.5
4,411,378	-		Echvi_3704	0.82	-3.1
4,411,435	+				-1.7
4,411,436	-				-1.6
4,411,436	-				-2.5
4,411,437	+				-1.3
4,411,438	-				-1.4
4,411,495	+				-1.6
4,411,495	+				+0.4
4,411,500	+				+0.4
4,411,501	-				-0.7
4,411,501	-				-0.3
4,411,501	-				+0.5
4,411,534	+				-0.6
4,411,534	+				-1.2
4,411,534	+				+0.7
4,411,534	+				+0.5
4,411,536	+				+1.2
4,411,536	+				-0.6
4,411,537	-				+0.2
4,411,538	+				+0.3
4,411,538	+				+0.1
4,411,539	-				+0.8
4,411,539	-				-0.0
4,411,539	-				-0.2
4,411,539	-				+0.2
4,411,570	-				-0.1
4,411,572	+				-1.5
4,411,573	-				+1.2
4,411,573	-				-0.5
4,411,573	-				+0.2
4,411,585	+				-0.8
4,411,596	+				-0.9
4,411,597	-				+0.2
4,411,597	-				+2.1
4,411,613	+				+1.1
4,411,613	+				+2.4
4,411,640	+				+0.1
4,411,723	+				+0.7
4,411,726	-				-0.2
4,411,790	+				-0.4
4,411,922	+		Echvi_3705	0.18	-0.2
4,411,923	-		Echvi_3705	0.18	+0.2
4,411,923	-		Echvi_3705	0.18	+1.2
4,411,923	-		Echvi_3705	0.18	+0.3
4,412,080	+		Echvi_3705	0.31	+1.5
4,412,080	+		Echvi_3705	0.31	+0.5
4,412,081	-		Echvi_3705	0.31	-1.3
4,412,081	-		Echvi_3705	0.31	-0.3
4,412,081	-		Echvi_3705	0.31	-0.0
4,412,168	-		Echvi_3705	0.39	+2.0
4,412,168	-		Echvi_3705	0.39	-0.0
4,412,257	+		Echvi_3705	0.46	+0.1
4,412,427	+		Echvi_3705	0.61	+1.2