Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3469

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,107,530	-		Echvi_3468	0.47	+0.6
4,107,599	+		Echvi_3468	0.51	+0.1
4,107,609	-		Echvi_3468	0.52	-0.1
4,107,665	+		Echvi_3468	0.55	+0.6
4,107,668	-		Echvi_3468	0.55	+1.5
4,107,698	+		Echvi_3468	0.57	-0.8
4,107,698	+		Echvi_3468	0.57	+1.8
4,107,698	+		Echvi_3468	0.57	-1.1
4,107,742	-		Echvi_3468	0.60	+0.8
4,107,787	-		Echvi_3468	0.62	+0.6
4,107,787	-		Echvi_3468	0.62	+0.4
4,107,787	-		Echvi_3468	0.62	+0.4
4,107,787	-		Echvi_3468	0.62	+0.1
4,107,894	-		Echvi_3468	0.69	+0.1
4,107,920	+		Echvi_3468	0.70	-1.3
4,107,921	-		Echvi_3468	0.70	+1.2
4,107,961	-		Echvi_3468	0.72	-0.1
4,107,964	+		Echvi_3468	0.73	-1.3
4,107,997	-		Echvi_3468	0.75	+0.1
4,108,032	-		Echvi_3468	0.77	+0.3
4,108,070	+		Echvi_3468	0.79	-0.4
4,108,070	+		Echvi_3468	0.79	-0.8
4,108,071	-		Echvi_3468	0.79	-0.0
4,108,085	-		Echvi_3468	0.80	+0.8
4,108,122	+		Echvi_3468	0.82	+0.4
4,108,122	+		Echvi_3468	0.82	-0.4
4,108,130	-		Echvi_3468	0.82	-0.6
4,108,133	+		Echvi_3468	0.82	-0.1
4,108,134	-		Echvi_3468	0.83	-1.5
4,108,134	-		Echvi_3468	0.83	-0.3
4,108,168	-		Echvi_3468	0.85	-0.4
4,108,168	-		Echvi_3468	0.85	+0.8
4,108,190	+		Echvi_3468	0.86	-0.9
4,108,191	-		Echvi_3468	0.86	+0.9
4,108,191	-		Echvi_3468	0.86	-0.2
4,108,191	-		Echvi_3468	0.86	+1.5
4,108,191	-		Echvi_3468	0.86	+1.1
4,108,312	+				+0.1
4,108,476	+				-0.6
4,108,483	+				-0.5
4,108,498	+				-0.8
4,108,498	+				+0.2
4,108,512	-				-0.0
4,108,514	+				-0.0
4,108,515	-				-0.4
4,108,569	+				-1.5
4,108,569	+				-1.1
4,108,660	+		Echvi_3469	0.15	-2.4
4,108,661	-		Echvi_3469	0.15	-0.2
4,108,741	+		Echvi_3469	0.25	-1.6
4,108,742	-		Echvi_3469	0.25	-0.4
4,108,750	+		Echvi_3469	0.26	-1.1
4,108,750	+		Echvi_3469	0.26	+0.9
4,108,751	-		Echvi_3469	0.26	-2.7
4,108,751	-		Echvi_3469	0.26	+0.9
4,108,751	-		Echvi_3469	0.26	+0.4
4,108,751	-		Echvi_3469	0.26	-0.2
4,108,751	-		Echvi_3469	0.26	-0.6
4,108,752	+		Echvi_3469	0.26	-2.6
4,108,752	+		Echvi_3469	0.26	-1.3
4,108,753	-		Echvi_3469	0.26	-0.7
4,108,753	-		Echvi_3469	0.26	+2.3
4,108,753	-		Echvi_3469	0.26	-0.9
4,108,756	-		Echvi_3469	0.27	-1.1
4,108,758	+		Echvi_3469	0.27	-1.9
4,108,759	-		Echvi_3469	0.27	-1.8
4,108,773	+		Echvi_3469	0.29	-0.4
4,108,773	+		Echvi_3469	0.29	-1.6
4,108,774	-		Echvi_3469	0.29	-0.3
4,108,774	-		Echvi_3469	0.29	+0.5
4,108,774	-		Echvi_3469	0.29	-0.2
4,108,775	+		Echvi_3469	0.29	-1.5
4,108,775	+		Echvi_3469	0.29	-1.3
4,108,775	+		Echvi_3469	0.29	+0.0
4,108,775	+		Echvi_3469	0.29	-1.9
4,108,776	-		Echvi_3469	0.29	-0.2
4,108,776	-		Echvi_3469	0.29	+1.7
4,108,833	-		Echvi_3469	0.36	+0.6
4,108,835	+		Echvi_3469	0.36	-1.7
4,108,947	+		Echvi_3469	0.49	-2.0
4,108,947	+		Echvi_3469	0.49	-1.6
4,108,978	+		Echvi_3469	0.53	-2.2
4,109,005	+		Echvi_3469	0.56	+0.5
4,109,006	-		Echvi_3469	0.56	-0.5
4,109,006	-		Echvi_3469	0.56	+1.5
4,109,006	-		Echvi_3469	0.56	+0.0
4,109,013	-		Echvi_3469	0.57	-1.5
4,109,035	+		Echvi_3469	0.59	-0.5
4,109,079	+		Echvi_3469	0.65	-3.6
4,109,080	-		Echvi_3469	0.65	+1.7
4,109,088	+		Echvi_3469	0.66	-1.0
4,109,088	+		Echvi_3469	0.66	-1.2
4,109,088	+		Echvi_3469	0.66	-3.6
4,109,089	-		Echvi_3469	0.66	-1.0
4,109,089	-		Echvi_3469	0.66	+0.1
4,109,089	-		Echvi_3469	0.66	-2.0
4,109,089	-		Echvi_3469	0.66	+0.2
4,109,102	+		Echvi_3469	0.67	-1.3
4,109,103	-		Echvi_3469	0.67	-0.2
4,109,118	-		Echvi_3469	0.69	-0.1
4,109,174	+		Echvi_3469	0.76	-1.4
4,109,174	+		Echvi_3469	0.76	-1.4
4,109,175	-		Echvi_3469	0.76	+0.2
4,109,236	-		Echvi_3469	0.83	-0.8
4,109,236	-		Echvi_3469	0.83	+0.7
4,109,278	+		Echvi_3469	0.88	-1.1
4,109,352	-				-0.1
4,109,372	-				+1.1
4,109,381	-				+0.1
4,109,387	-				-0.4
4,109,390	-				-0.3
4,109,395	-				-2.5
4,109,405	-				+0.4
4,109,407	+				-1.6
4,109,408	-				-0.4
4,109,432	+				-1.4
4,109,458	+				-2.2
4,109,458	+				-2.1
4,109,486	-				-0.7
4,109,490	-				+0.6
4,109,536	+		Echvi_3470	0.15	-2.6
4,109,537	-		Echvi_3470	0.15	-0.5
4,109,541	+		Echvi_3470	0.16	-1.3
4,109,542	-		Echvi_3470	0.16	+0.0
4,109,545	+		Echvi_3470	0.17	-0.3
4,109,556	+		Echvi_3470	0.19	-2.9
4,109,557	-		Echvi_3470	0.19	-0.8
4,109,589	+		Echvi_3470	0.24	-1.4
4,109,589	+		Echvi_3470	0.24	-1.4
4,109,589	+		Echvi_3470	0.24	-2.5
4,109,589	+		Echvi_3470	0.24	-1.3
4,109,590	-		Echvi_3470	0.24	+0.4
4,109,597	+		Echvi_3470	0.25	-0.1
4,109,597	+		Echvi_3470	0.25	-0.5
4,109,598	-		Echvi_3470	0.25	-0.6
4,109,635	+		Echvi_3470	0.31	-1.6
4,109,653	+		Echvi_3470	0.34	-1.5
4,109,653	+		Echvi_3470	0.34	-1.5
4,109,680	-		Echvi_3470	0.39	+0.1
4,109,686	-				+0.9
4,109,714	+		Echvi_3470	0.44	-1.9
4,109,722	+		Echvi_3470	0.46	-1.6
4,109,768	-		Echvi_3470	0.53	+1.4
4,109,896	+		Echvi_3470	0.74	-1.9
4,109,897	-		Echvi_3470	0.74	+0.3
4,109,897	-		Echvi_3470	0.74	+2.1
4,109,897	-		Echvi_3470	0.74	-0.5
4,109,899	-		Echvi_3470	0.74	-0.5
4,109,912	+		Echvi_3470	0.76	-2.2
4,109,946	-		Echvi_3470	0.82	+0.4
4,109,963	+		Echvi_3470	0.85	-3.2
4,109,966	+		Echvi_3470	0.85	-1.5
4,109,980	+		Echvi_3470	0.87	-0.2
4,109,986	-		Echvi_3470	0.88	-0.6
4,110,021	+				-0.6
4,110,022	-				+0.1
4,110,025	+				-1.6
4,110,032	+				-1.9
4,110,033	-				+0.1
4,110,044	-				+0.1
4,110,054	+				-0.3
4,110,071	+				-1.3
4,110,071	+				+2.1
4,110,071	+				+0.4
4,110,073	+				+1.0
4,110,073	+				+0.0
4,110,073	+				+0.7
4,110,081	-				+1.3
4,110,092	+				+0.5
4,110,093	-				+0.1
4,110,114	-				-0.5
4,110,175	+		Echvi_3471	0.13	-1.1
4,110,185	+		Echvi_3471	0.14	+0.3
4,110,186	-		Echvi_3471	0.14	-1.6
4,110,190	+		Echvi_3471	0.14	-0.8
4,110,233	-		Echvi_3471	0.19	+2.1
4,110,239	+		Echvi_3471	0.20	-1.7
4,110,239	+		Echvi_3471	0.20	+0.1
4,110,239	+		Echvi_3471	0.20	-1.0
4,110,239	+		Echvi_3471	0.20	+0.3
4,110,239	+		Echvi_3471	0.20	-0.1
4,110,239	+		Echvi_3471	0.20	-0.1
4,110,240	-		Echvi_3471	0.20	+0.3
4,110,240	-		Echvi_3471	0.20	+1.0
4,110,241	+		Echvi_3471	0.20	+0.5
4,110,241	+		Echvi_3471	0.20	+0.5
4,110,241	+		Echvi_3471	0.20	-0.8
4,110,241	+		Echvi_3471	0.20	-0.4
4,110,241	+		Echvi_3471	0.20	-1.5
4,110,241	+		Echvi_3471	0.20	-1.4
4,110,241	+		Echvi_3471	0.20	-0.2
4,110,241	+		Echvi_3471	0.20	+2.3
4,110,241	+		Echvi_3471	0.20	-0.1
4,110,242	-		Echvi_3471	0.20	+1.5
4,110,242	-		Echvi_3471	0.20	-0.2
4,110,242	-		Echvi_3471	0.20	-0.6
4,110,284	+		Echvi_3471	0.25	+0.7
4,110,284	+		Echvi_3471	0.25	+0.0
4,110,351	+		Echvi_3471	0.32	-0.8
4,110,351	+		Echvi_3471	0.32	+2.1
4,110,351	+		Echvi_3471	0.32	-1.3
4,110,351	+		Echvi_3471	0.32	-0.6
4,110,352	-		Echvi_3471	0.32	+1.5