Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2485

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
2,952,001	-		Echvi_2484	0.77	+0.3
2,952,033	-		Echvi_2484	0.78	-0.3
2,952,033	-		Echvi_2484	0.78	-0.1
2,952,067	+		Echvi_2484	0.79	+0.6
2,952,260	+		Echvi_2484	0.85	+1.1
2,952,260	+		Echvi_2484	0.85	+0.6
2,952,260	+		Echvi_2484	0.85	+0.3
2,952,261	-		Echvi_2484	0.85	-0.6
2,952,261	-		Echvi_2484	0.85	+0.9
2,952,362	+		Echvi_2484	0.89	+0.4
2,952,460	+				+0.7
2,952,460	+				+0.2
2,952,460	+				-0.5
2,952,460	+				-0.1
2,952,461	-				+0.6
2,952,465	+				+0.4
2,952,496	+				-0.0
2,952,553	+				-0.9
2,952,571	+				-0.2
2,952,571	+				-1.6
2,952,612	+				-0.5
2,952,613	-				-0.2
2,952,617	+				+1.3
2,952,617	+				+0.3
2,952,618	-				-0.3
2,952,618	-				-0.8
2,952,661	+				+0.1
2,952,744	+				-0.0
2,952,788	+				-0.8
2,952,914	-				-0.6
2,952,916	-				+3.1
2,952,938	-				-0.2
2,952,938	-				-0.4
2,952,938	-				+0.8
2,952,938	-				-1.3
2,952,968	+				+1.1
2,952,972	+				-0.9
2,952,973	-				-0.2
2,952,994	+				-2.0
2,953,061	+				-0.1
2,953,061	+				-0.9
2,953,061	+				+0.2
2,953,063	+				-2.0
2,953,064	-				+1.1
2,953,064	-				-0.1
2,953,070	+				-0.6
2,953,070	+				-2.1
2,953,155	+		Echvi_2485	0.15	-0.4
2,953,156	-		Echvi_2485	0.15	-0.7
2,953,156	-		Echvi_2485	0.15	-1.1
2,953,174	+		Echvi_2485	0.17	-1.0
2,953,174	+		Echvi_2485	0.17	-0.6
2,953,174	+		Echvi_2485	0.17	+0.6
2,953,175	-		Echvi_2485	0.17	-1.3
2,953,175	-		Echvi_2485	0.17	+0.4
2,953,206	+		Echvi_2485	0.20	-0.6
2,953,207	-		Echvi_2485	0.20	-0.6
2,953,232	+		Echvi_2485	0.22	+0.6
2,953,233	-		Echvi_2485	0.22	-0.0
2,953,278	-		Echvi_2485	0.26	-1.0
2,953,278	-		Echvi_2485	0.26	-0.6
2,953,328	+		Echvi_2485	0.31	-0.1
2,953,400	+		Echvi_2485	0.37	-0.4
2,953,400	+		Echvi_2485	0.37	+0.6
2,953,401	-		Echvi_2485	0.37	-0.6
2,953,422	+		Echvi_2485	0.39	+0.4
2,953,423	-		Echvi_2485	0.39	-0.4
2,953,423	-		Echvi_2485	0.39	-1.4
2,953,423	-		Echvi_2485	0.39	-2.0
2,953,423	-		Echvi_2485	0.39	-1.3
2,953,483	+		Echvi_2485	0.45	+2.4
2,953,484	-		Echvi_2485	0.45	-0.2
2,953,484	-		Echvi_2485	0.45	-0.2
2,953,490	-		Echvi_2485	0.46	-0.4
2,953,490	-		Echvi_2485	0.46	+0.6
2,953,558	-		Echvi_2485	0.52	-1.4
2,953,568	+		Echvi_2485	0.53	+0.3
2,953,568	+		Echvi_2485	0.53	+0.4
2,953,568	+		Echvi_2485	0.53	-0.9
2,953,568	+		Echvi_2485	0.53	+0.0
2,953,645	+		Echvi_2485	0.60	+0.1
2,953,646	-		Echvi_2485	0.60	-0.4
2,953,654	+		Echvi_2485	0.61	+1.6
2,953,654	+		Echvi_2485	0.61	+0.3
2,953,663	+		Echvi_2485	0.62	+0.2
2,953,664	-		Echvi_2485	0.62	+0.2
2,953,708	+		Echvi_2485	0.66	+0.2
2,953,766	+		Echvi_2485	0.71	+0.3
2,953,766	+		Echvi_2485	0.71	-1.7
2,953,784	+		Echvi_2485	0.73	-0.1
2,953,852	+		Echvi_2485	0.79	-0.2
2,953,852	+		Echvi_2485	0.79	-0.5
2,953,852	+		Echvi_2485	0.79	-0.3
2,953,853	-		Echvi_2485	0.79	+0.3
2,953,853	-		Echvi_2485	0.79	+0.4
2,953,853	-		Echvi_2485	0.79	-1.0
2,953,908	+		Echvi_2485	0.84	+0.2
2,953,917	-		Echvi_2485	0.85	-0.3
2,953,934	-		Echvi_2485	0.86	+0.0
2,953,934	-		Echvi_2485	0.86	+0.2
2,953,936	-		Echvi_2485	0.87	-0.1
2,953,948	+		Echvi_2485	0.88	-0.3
2,953,949	-		Echvi_2485	0.88	+0.6
2,953,960	-		Echvi_2485	0.89	-0.3
2,954,008	+				+1.6
2,954,023	+				-1.2
2,954,067	+				-0.4
2,954,084	+				-0.3
2,954,084	+				+1.6
2,954,085	-				+0.6
2,954,085	-				-1.3
2,954,085	-				+0.0
2,954,095	+				-0.1
2,954,104	-				+0.5
2,954,152	+				-0.4
2,954,172	+				+0.4
2,954,172	+				+0.8
2,954,173	-				-0.0
2,954,173	-				-1.3
2,954,173	-				-0.7
2,954,173	-				-0.4
2,954,175	+				+0.0
2,954,180	-				+0.5
2,954,196	+				+0.6
2,954,213	+				+0.2
2,954,224	+				-0.3
2,954,224	+				+1.2
2,954,224	+				+1.8
2,954,224	+				-0.9
2,954,224	+				-1.8
2,954,225	-				-0.4
2,954,260	-				-0.0
2,954,286	-				+0.6
2,954,300	+				-0.6
2,954,300	+				+0.7
2,954,301	-				-0.7
2,954,333	+				+0.6
2,954,340	+				-1.2
2,954,340	+				+0.5
2,954,340	+				+0.6
2,954,341	-				-0.4
2,954,344	+				+0.8
2,954,344	+				+0.4
2,954,345	-				+1.1
2,954,345	-				-0.1
2,954,348	+				-0.3
2,954,376	+				-0.9
2,954,377	-				+1.9
2,954,377	-				-0.0
2,954,380	-				-0.7
2,954,434	+		Echvi_2486	0.16	-1.0
2,954,435	-		Echvi_2486	0.16	-1.8
2,954,437	+		Echvi_2486	0.16	-0.0
2,954,445	-		Echvi_2486	0.17	+0.1
2,954,528	-		Echvi_2486	0.31	-3.2
2,954,531	+		Echvi_2486	0.32	-0.9
2,954,531	+		Echvi_2486	0.32	+0.3
2,954,531	+		Echvi_2486	0.32	+0.1
2,954,532	-		Echvi_2486	0.32	+0.2
2,954,532	-		Echvi_2486	0.32	-0.5
2,954,532	-		Echvi_2486	0.32	+2.6
2,954,532	-		Echvi_2486	0.32	+0.5
2,954,576	-		Echvi_2486	0.39	-0.2
2,954,581	-		Echvi_2486	0.40	-0.0
2,954,609	-		Echvi_2486	0.45	+1.2
2,954,609	-		Echvi_2486	0.45	-0.5
2,954,611	-		Echvi_2486	0.45	-0.1
2,954,644	+		Echvi_2486	0.51	+1.1
2,954,644	+		Echvi_2486	0.51	+0.9
2,954,668	+		Echvi_2486	0.55	-0.4
2,954,668	+		Echvi_2486	0.55	-0.0
2,954,668	+		Echvi_2486	0.55	+0.4
2,954,778	+		Echvi_2486	0.73	+0.6
2,954,778	+		Echvi_2486	0.73	+1.1
2,954,778	+		Echvi_2486	0.73	-1.0
2,954,779	-		Echvi_2486	0.73	-1.8
2,954,826	+		Echvi_2486	0.81	-1.5
2,954,827	-		Echvi_2486	0.81	+0.6
2,954,827	-		Echvi_2486	0.81	-0.3
2,954,827	-		Echvi_2486	0.81	-0.4
2,954,842	-		Echvi_2486	0.84	+2.0
2,955,008	-				+0.9
2,955,028	-				-0.4
2,955,077	+				+0.4
2,955,079	+				+0.4
2,955,080	-				-0.5