Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2322

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
2,755,649	-		Echvi_2319	0.73	+1.1
2,755,649	-		Echvi_2319	0.73	+0.5
2,755,649	-		Echvi_2319	0.73	+1.8
2,755,753	+		Echvi_2319	0.86	-2.3
2,755,838	+				-0.4
2,755,920	-				-0.3
2,755,920	-				-0.6
2,755,920	-				-1.4
2,755,933	-				+0.4
2,755,999	-		Echvi_2320	0.13	+1.6
2,756,066	+		Echvi_2320	0.37	+0.1
2,756,094	+		Echvi_2320	0.47	-2.3
2,756,095	-		Echvi_2320	0.47	-0.5
2,756,097	+		Echvi_2320	0.48	-0.4
2,756,098	-		Echvi_2320	0.48	-0.2
2,756,108	+		Echvi_2320	0.52	-0.2
2,756,108	+		Echvi_2320	0.52	-0.8
2,756,129	+		Echvi_2320	0.59	-0.6
2,756,130	-		Echvi_2320	0.59	-0.7
2,756,130	-		Echvi_2320	0.59	+0.4
2,756,134	+		Echvi_2320	0.61	-0.9
2,756,134	+		Echvi_2320	0.61	-0.6
2,756,135	-		Echvi_2320	0.61	-0.9
2,756,176	+		Echvi_2320	0.76	+0.4
2,756,176	+		Echvi_2320	0.76	-0.7
2,756,177	-		Echvi_2320	0.76	+0.3
2,756,178	+		Echvi_2320	0.77	-0.6
2,756,217	+				+0.8
2,756,230	-				-0.7
2,756,263	+				-1.5
2,756,299	-				+0.1
2,756,394	+		Echvi_2321	0.34	-0.2
2,756,395	-		Echvi_2321	0.35	+2.7
2,756,395	-		Echvi_2321	0.35	+0.6
2,756,395	-		Echvi_2321	0.35	+2.5
2,756,447	+		Echvi_2321	0.48	+0.1
2,756,447	+		Echvi_2321	0.48	+0.1
2,756,478	+		Echvi_2321	0.56	+1.2
2,756,478	+		Echvi_2321	0.56	-0.7
2,756,480	+		Echvi_2321	0.57	+0.9
2,756,534	+		Echvi_2321	0.71	+1.8
2,756,535	-		Echvi_2321	0.71	+1.6
2,756,653	+				+1.7
2,756,654	-				+0.3
2,756,687	-				-0.2
2,756,715	-				-0.2
2,756,727	+		Echvi_2322	0.11	+1.2
2,756,728	-		Echvi_2322	0.11	+1.9
2,756,728	-		Echvi_2322	0.11	-0.0
2,756,728	-		Echvi_2322	0.11	+1.0
2,756,734	-		Echvi_2322	0.12	-0.1
2,756,779	-		Echvi_2322	0.18	+0.3
2,756,786	-		Echvi_2322	0.19	+0.5
2,756,821	+		Echvi_2322	0.23	+3.7
2,756,822	-		Echvi_2322	0.23	+0.3
2,756,919	-		Echvi_2322	0.36	+0.1
2,756,967	-		Echvi_2322	0.43	-0.7
2,756,968	+		Echvi_2322	0.43	-0.7
2,756,983	+		Echvi_2322	0.45	+0.6
2,756,983	+		Echvi_2322	0.45	+1.2
2,756,983	+		Echvi_2322	0.45	+1.6
2,756,983	+		Echvi_2322	0.45	-0.7
2,757,241	+		Echvi_2322	0.80	+2.3
2,757,241	+		Echvi_2322	0.80	+0.8
2,757,242	-		Echvi_2322	0.80	+0.0
2,757,246	+		Echvi_2322	0.80	+0.7
2,757,368	-				+0.0
2,757,370	+				+0.8
2,757,374	-				+1.7
2,757,377	-				+0.6
2,757,398	+				-0.1
2,757,398	+				+0.9
2,757,399	-				-1.1
2,757,435	-				+0.6
2,757,465	+				+0.5
2,757,472	+				+0.1
2,757,550	+		Echvi_2323	0.12	-1.2
2,758,170	+		Echvi_2323	0.79	-1.6
2,758,317	+				+1.6
2,758,327	+				+0.2
2,758,328	-				-0.5
2,758,335	+				-1.1
2,758,335	+				+0.2
2,758,336	-				-0.9
2,758,384	+		Echvi_2324	0.11	+0.3
2,758,387	-		Echvi_2324	0.12	-0.4