Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2087

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
2,463,434	-				-0.2
2,463,434	-				+0.8
2,463,465	+				-0.5
2,463,465	+				+0.3
2,463,465	+				-0.4
2,463,466	-				-2.5
2,463,891	-		Echvi_2086	0.90	-1.0
2,463,894	-				-1.1
2,463,980	-				-0.9
2,464,002	-		Echvi_2087	0.12	-0.6
2,464,011	+		Echvi_2087	0.13	-0.3
2,464,037	-		Echvi_2087	0.16	-0.7
2,464,150	+		Echvi_2087	0.30	+1.2
2,464,159	+		Echvi_2087	0.31	+2.0
2,464,159	+		Echvi_2087	0.31	-0.6
2,464,161	+		Echvi_2087	0.32	+0.6
2,464,165	+		Echvi_2087	0.32	-0.6
2,464,165	+		Echvi_2087	0.32	+1.6
2,464,207	-		Echvi_2087	0.37	+0.1
2,464,207	-		Echvi_2087	0.37	-2.6
2,464,210	+		Echvi_2087	0.38	-0.7
2,464,231	-		Echvi_2087	0.40	+0.0
2,464,254	+		Echvi_2087	0.43	-0.6
2,464,255	-		Echvi_2087	0.43	+0.1
2,464,255	-		Echvi_2087	0.43	+1.6
2,464,256	+		Echvi_2087	0.43	+0.2
2,464,256	+		Echvi_2087	0.43	+0.9
2,464,256	+		Echvi_2087	0.43	-0.7
2,464,257	-		Echvi_2087	0.44	-1.4
2,464,257	-		Echvi_2087	0.44	-1.0
2,464,368	+		Echvi_2087	0.57	-0.5
2,464,368	+		Echvi_2087	0.57	-0.6
2,464,458	+		Echvi_2087	0.68	+0.3
2,464,458	+		Echvi_2087	0.68	-0.8
2,464,459	-		Echvi_2087	0.69	-0.8
2,464,459	-		Echvi_2087	0.69	-1.3
2,464,459	-		Echvi_2087	0.69	-0.9
2,464,459	-		Echvi_2087	0.69	-1.6
2,464,459	-		Echvi_2087	0.69	-0.6
2,464,459	-		Echvi_2087	0.69	-0.4
2,464,459	-		Echvi_2087	0.69	-0.5
2,464,459	-		Echvi_2087	0.69	+0.1
2,464,480	-		Echvi_2087	0.71	-0.3
2,464,480	-		Echvi_2087	0.71	-1.0
2,464,552	-		Echvi_2087	0.80	-0.8
2,464,552	-		Echvi_2087	0.80	+0.2
2,464,560	+		Echvi_2087	0.81	-0.4
2,464,560	+		Echvi_2087	0.81	+1.8
2,464,581	-		Echvi_2087	0.84	+0.4
2,464,711	+				+0.5
2,464,711	+				-0.4
2,464,712	-				-1.2
2,464,712	-				+0.8
2,464,752	-				-0.5
2,464,847	+		Echvi_2088	0.25	+0.2
2,464,848	-		Echvi_2088	0.26	-0.3
2,464,866	-		Echvi_2088	0.29	-0.2
2,464,866	-		Echvi_2088	0.29	+0.5
2,464,869	+		Echvi_2088	0.30	+1.2
2,464,897	-		Echvi_2088	0.35	-1.0
2,464,938	-		Echvi_2088	0.43	+0.8
2,465,091	-		Echvi_2088	0.73	-1.6
2,465,108	-		Echvi_2088	0.76	+0.2
2,465,108	-		Echvi_2088	0.76	+0.5
2,465,166	+		Echvi_2088	0.87	+0.4
2,465,250	+				+0.6
2,465,263	-				-0.7
2,465,289	+				-1.5
2,465,290	-				+0.1
2,465,294	-				+0.3
2,465,314	-				+0.2
2,465,338	+				-1.6
2,465,338	+				-0.2
2,465,339	-				+0.9
2,465,339	-				+2.3
2,465,413	+				+0.5
2,465,414	-				+0.9
2,465,428	+				-0.0
2,465,429	-				-0.1
2,465,432	+				+0.1
2,465,432	+				-0.4
2,465,433	-				-0.2
2,465,440	+				+0.6
2,465,443	+				-1.0
2,465,444	-				+0.8
2,465,446	+				-1.2
2,465,449	+				+1.2
2,465,449	+				-0.8
2,465,452	+				-0.2
2,465,458	+				-0.6
2,465,480	+				-0.2
2,465,480	+				-1.3
2,465,480	+				-1.2
2,465,480	+				-1.6
2,465,481	-				-0.7
2,465,481	-				-1.6
2,465,482	+				-0.0
2,465,482	+				-0.2
2,465,501	+				-0.4
2,465,595	-		Echvi_2089	0.14	+1.1
2,465,601	-		Echvi_2089	0.15	-0.3
2,465,691	+		Echvi_2089	0.22	-0.0