Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1840

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
2,156,584	+				+0.2
2,156,585	-				+1.7
2,156,599	-				+0.5
2,156,602	+				+0.9
2,156,602	+				+0.2
2,156,602	+				+0.9
2,156,602	+				+0.6
2,156,603	-				+1.3
2,156,603	-				+2.0
2,156,603	-				+0.6
2,156,604	+				-0.2
2,156,604	+				+0.4
2,156,605	-				+0.2
2,156,605	-				+1.3
2,156,605	-				+0.8
2,156,683	+				+1.0
2,156,725	+				-0.4
2,156,728	+				-0.2
2,156,728	+				-0.9
2,156,816	-		Echvi_1840	0.14	+0.1
2,156,816	-		Echvi_1840	0.14	-0.4
2,156,827	+		Echvi_1840	0.16	+0.1
2,157,046	-		Echvi_1840	0.45	+0.4
2,157,075	+		Echvi_1840	0.48	+1.2
2,157,076	-		Echvi_1840	0.48	+0.7
2,157,145	+		Echvi_1840	0.58	-0.2
2,157,145	+		Echvi_1840	0.58	+0.2
2,157,162	+		Echvi_1840	0.60	-0.1
2,157,162	+		Echvi_1840	0.60	+1.0
2,157,163	-		Echvi_1840	0.60	-0.4
2,157,231	+		Echvi_1840	0.69	-0.1
2,157,266	+		Echvi_1840	0.74	+0.5
2,157,267	-		Echvi_1840	0.74	-1.2
2,157,449	+				+0.5
2,157,452	+				-0.6
2,157,528	+				-0.8
2,157,535	+				-0.1
2,157,543	-				-1.1
2,157,667	-		Echvi_1841	0.35	-1.2
2,157,695	+		Echvi_1841	0.41	-1.9
2,157,721	+		Echvi_1841	0.47	-1.2
2,157,721	+		Echvi_1841	0.47	+1.6
2,157,721	+		Echvi_1841	0.47	+0.0
2,157,722	-		Echvi_1841	0.47	+0.5
2,157,722	-		Echvi_1841	0.47	+0.8
2,157,727	-		Echvi_1841	0.49	+0.5
2,157,772	+		Echvi_1841	0.59	+1.1
2,157,772	+		Echvi_1841	0.59	-0.6
2,157,772	+		Echvi_1841	0.59	-1.3
2,157,773	-		Echvi_1841	0.59	-0.2
2,157,773	-		Echvi_1841	0.59	+1.3
2,157,794	+		Echvi_1841	0.64	-1.1
2,157,890	+		Echvi_1841	0.87	+0.1
2,157,924	+				-0.8
2,157,954	+				-1.3
2,157,954	+				-0.3
2,157,967	-				-0.8
2,157,974	+				+0.4
2,158,155	+		Echvi_1842	0.17	+0.1
2,158,172	-		Echvi_1842	0.19	+0.3
2,158,176	+		Echvi_1842	0.19	+0.7
2,158,182	+		Echvi_1842	0.20	+0.3
2,158,204	+		Echvi_1842	0.22	-0.2
2,158,253	+		Echvi_1842	0.27	+0.1
2,158,253	+		Echvi_1842	0.27	+1.8
2,158,253	+		Echvi_1842	0.27	-0.2
2,158,253	+		Echvi_1842	0.27	-0.2
2,158,254	-		Echvi_1842	0.27	+1.0
2,158,254	-		Echvi_1842	0.27	-0.9
2,158,254	-		Echvi_1842	0.27	-1.6
2,158,344	-		Echvi_1842	0.35	-0.4
2,158,361	-		Echvi_1842	0.37	+0.6
2,158,379	+		Echvi_1842	0.39	+1.4