Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1837

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
2,151,941	+				-1.6
2,151,954	+				+0.1
2,151,970	+				+1.6
2,152,003	+				-1.6
2,152,003	+				-0.3
2,152,841	+				-0.2
2,152,852	+				-0.4
2,152,856	+				-0.3
2,152,856	+				-0.9
2,152,856	+				-0.3
2,152,857	-				+0.5
2,152,880	+				-0.7
2,152,881	-				-0.8
2,152,881	-				-0.2
2,152,934	-				+0.8
2,153,029	+				-2.5
2,153,030	-				+0.4
2,153,062	+		Echvi_1837	0.12	+0.4
2,153,131	-		Echvi_1837	0.18	-1.7
2,153,139	+		Echvi_1837	0.19	-0.5
2,153,146	+		Echvi_1837	0.20	+0.2
2,153,147	-		Echvi_1837	0.20	+0.0
2,153,147	-		Echvi_1837	0.20	+0.3
2,153,175	+		Echvi_1837	0.22	-1.5
2,153,175	+		Echvi_1837	0.22	+0.9
2,153,179	+		Echvi_1837	0.23	-0.1
2,153,179	+		Echvi_1837	0.23	-1.6
2,153,180	-		Echvi_1837	0.23	-0.5
2,153,343	-		Echvi_1837	0.38	-0.4
2,153,438	+		Echvi_1837	0.46	-1.4
2,153,443	+		Echvi_1837	0.47	-0.2
2,153,443	+		Echvi_1837	0.47	-0.3
2,153,444	-		Echvi_1837	0.47	-0.4
2,153,444	-		Echvi_1837	0.47	+0.2
2,153,470	-		Echvi_1837	0.49	-0.2
2,153,525	-		Echvi_1837	0.54	-0.7
2,153,546	+		Echvi_1837	0.56	-0.2
2,153,546	+		Echvi_1837	0.56	+2.6
2,153,564	+		Echvi_1837	0.58	-0.7
2,153,565	-		Echvi_1837	0.58	+0.6
2,153,613	-		Echvi_1837	0.63	+1.2
2,153,677	+		Echvi_1837	0.68	-0.5
2,153,750	+		Echvi_1837	0.75	-0.5
2,153,751	-		Echvi_1837	0.75	-0.1
2,153,760	+		Echvi_1837	0.76	-0.4
2,153,760	+		Echvi_1837	0.76	-2.2
2,153,760	+		Echvi_1837	0.76	+0.1
2,153,760	+		Echvi_1837	0.76	+0.4
2,153,761	-		Echvi_1837	0.76	-0.6
2,153,827	+		Echvi_1837	0.82	-0.2
2,153,832	-		Echvi_1837	0.83	-1.2
2,153,862	+		Echvi_1837	0.85	-2.1
2,153,863	-		Echvi_1837	0.85	-0.1
2,153,863	-		Echvi_1837	0.85	-0.9
2,153,863	-		Echvi_1837	0.85	-0.9
2,153,928	+				-0.7
2,153,929	-				+0.4
2,153,929	-				-0.8
2,153,929	-				-0.8
2,153,929	-				+0.7
2,153,929	-				-1.1
2,153,946	-				+0.2
2,154,044	-				+0.3
2,154,078	+				-1.4
2,154,082	+				-0.2
2,154,124	+				+0.1
2,154,161	+		Echvi_1838	0.25	+0.0
2,154,162	-		Echvi_1838	0.26	-1.7
2,154,190	+		Echvi_1838	0.47	-2.7
2,154,261	+				-3.2
2,154,262	-				+1.7