Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1108

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
1,270,546	+				+3.0
1,270,546	+				-0.1
1,270,712	+		Echvi_1107	0.25	+0.1
1,270,713	-		Echvi_1107	0.26	+1.1
1,270,720	-		Echvi_1107	0.26	-0.8
1,270,759	-		Echvi_1107	0.31	+1.7
1,270,759	-		Echvi_1107	0.31	-0.7
1,270,789	+		Echvi_1107	0.34	-0.3
1,270,789	+		Echvi_1107	0.34	-0.3
1,270,790	-		Echvi_1107	0.34	-1.5
1,270,790	-		Echvi_1107	0.34	+0.2
1,270,811	+		Echvi_1107	0.37	-0.6
1,270,811	+		Echvi_1107	0.37	+0.9
1,270,811	+		Echvi_1107	0.37	+0.5
1,270,811	+		Echvi_1107	0.37	+0.7
1,270,812	-		Echvi_1107	0.37	-1.4
1,270,812	-		Echvi_1107	0.37	-0.5
1,270,812	-		Echvi_1107	0.37	-0.1
1,270,812	-		Echvi_1107	0.37	+0.2
1,270,815	+		Echvi_1107	0.37	+2.1
1,270,815	+		Echvi_1107	0.37	+0.3
1,270,816	-		Echvi_1107	0.37	+0.5
1,270,816	-		Echvi_1107	0.37	-0.4
1,270,816	-		Echvi_1107	0.37	-0.1
1,270,816	-		Echvi_1107	0.37	-0.8
1,270,820	+		Echvi_1107	0.38	-0.3
1,270,820	+		Echvi_1107	0.38	+0.4
1,270,821	-		Echvi_1107	0.38	+0.4
1,270,821	-		Echvi_1107	0.38	-0.3
1,270,827	-		Echvi_1107	0.38	+0.1
1,270,836	+		Echvi_1107	0.39	-0.9
1,270,960	+		Echvi_1107	0.53	+0.2
1,270,960	+		Echvi_1107	0.53	+0.0
1,271,016	-		Echvi_1107	0.60	+0.3
1,271,017	+		Echvi_1107	0.60	+0.1
1,271,050	+		Echvi_1107	0.63	+0.9
1,271,050	+		Echvi_1107	0.63	-1.0
1,271,051	-		Echvi_1107	0.64	-1.2
1,271,051	-		Echvi_1107	0.64	+1.2
1,271,170	+		Echvi_1107	0.77	-0.4
1,271,171	-		Echvi_1107	0.77	+0.8
1,271,228	+		Echvi_1107	0.83	+0.4
1,271,228	+		Echvi_1107	0.83	+0.0
1,271,387	+				-0.9
1,271,387	+				-0.9
1,271,387	+				-1.6
1,271,388	-				+1.9
1,271,388	-				-0.2
1,271,404	-				+1.0
1,271,404	-				-1.3
1,271,408	+				-1.9
1,271,408	+				+0.2
1,271,408	+				+0.9
1,271,408	+				+0.8
1,271,408	+				+0.4
1,271,409	-				+0.9
1,271,409	-				+1.1
1,271,409	-				+1.7
1,271,409	-				-0.5
1,271,409	-				-0.4
1,271,410	+				+0.7
1,271,410	+				-1.3
1,271,411	-				+0.5
1,271,422	+				+0.2
1,271,441	+				+2.7
1,271,499	+				+0.4
1,271,499	+				+0.0
1,271,499	+				-0.2
1,271,499	+				-0.6
1,271,499	+				+0.9
1,271,499	+				+0.9
1,271,499	+				-0.8
1,271,499	+				-0.2
1,271,499	+				-1.9
1,271,500	-				+0.3
1,271,500	-				-0.6
1,271,500	-				-0.0
1,271,500	-				+0.3
1,271,500	-				-0.6
1,271,500	-				+0.0
1,271,519	+				+2.7
1,271,519	+				+0.2
1,271,519	+				+0.3
1,271,520	-				+0.5
1,271,520	-				-0.1
1,271,520	-				+0.8
1,271,533	+				-0.0
1,271,533	+				+0.4
1,271,533	+				-0.4
1,271,534	-				-0.0
1,271,534	-				-0.2
1,271,534	-				-0.6
1,271,688	+		Echvi_1108	0.15	-0.2
1,271,689	-		Echvi_1108	0.15	+0.2
1,271,689	-		Echvi_1108	0.15	+0.2
1,271,689	-		Echvi_1108	0.15	+0.4
1,271,689	-		Echvi_1108	0.15	-0.5
1,271,761	+		Echvi_1108	0.22	-0.6
1,271,762	-		Echvi_1108	0.22	+0.2
1,271,764	+		Echvi_1108	0.22	-1.7
1,271,764	+		Echvi_1108	0.22	-0.1
1,271,764	+		Echvi_1108	0.22	-0.2
1,271,765	-		Echvi_1108	0.23	-0.3
1,271,780	+		Echvi_1108	0.24	-0.7
1,271,780	+		Echvi_1108	0.24	-0.3
1,271,781	-		Echvi_1108	0.24	-1.2
1,271,781	-		Echvi_1108	0.24	-0.6
1,271,781	-		Echvi_1108	0.24	-0.5
1,271,810	-		Echvi_1108	0.27	+1.0
1,271,844	+		Echvi_1108	0.30	-0.1
1,271,845	-		Echvi_1108	0.30	+0.0
1,271,881	+		Echvi_1108	0.34	-0.4
1,271,900	-		Echvi_1108	0.35	-0.6
1,272,150	+		Echvi_1108	0.59	+0.2
1,272,150	+		Echvi_1108	0.59	-0.1
1,272,212	-		Echvi_1108	0.65	+0.6
1,272,221	-		Echvi_1108	0.66	-0.5
1,272,225	+		Echvi_1108	0.66	-0.6
1,272,225	+		Echvi_1108	0.66	-0.1
1,272,225	+		Echvi_1108	0.66	-0.2
1,272,226	-		Echvi_1108	0.66	-0.9
1,272,226	-		Echvi_1108	0.66	+0.4
1,272,295	+		Echvi_1108	0.73	+0.2
1,272,295	+		Echvi_1108	0.73	+0.8
1,272,295	+		Echvi_1108	0.73	-0.6
1,272,295	+		Echvi_1108	0.73	-0.6
1,272,295	+		Echvi_1108	0.73	-0.5
1,272,295	+		Echvi_1108	0.73	+0.3
1,272,295	+		Echvi_1108	0.73	-0.8
1,272,296	-		Echvi_1108	0.73	-0.3
1,272,296	-		Echvi_1108	0.73	+0.0
1,272,296	-		Echvi_1108	0.73	+0.1
1,272,296	-		Echvi_1108	0.73	+0.8
1,272,296	-		Echvi_1108	0.73	+0.0
1,272,298	+		Echvi_1108	0.73	-1.4
1,272,299	-		Echvi_1108	0.73	+0.1
1,272,299	-		Echvi_1108	0.73	-0.5
1,272,469	+		Echvi_1108	0.89	-0.1
1,272,469	+		Echvi_1108	0.89	+0.2
1,272,469	+		Echvi_1108	0.89	-0.5
1,272,470	-		Echvi_1108	0.89	+1.7
1,272,470	-		Echvi_1108	0.89	-2.8
1,272,499	+				+0.8
1,272,499	+				-0.8
1,272,499	+				+0.5
1,272,499	+				-0.1
1,272,499	+				-2.6
1,272,499	+				-0.7
1,272,499	+				+0.4
1,272,499	+				+1.0
1,272,500	-				+0.6
1,272,500	-				+0.1
1,272,500	-				+0.1
1,272,500	-				-1.1
1,272,500	-				-0.1
1,272,500	-				-0.1
1,272,500	-				-0.2
1,272,500	-				+1.3
1,272,502	-				-0.3
1,272,608	+				+0.3
1,272,720	+		Echvi_1109	0.21	-0.3
1,272,819	+		Echvi_1109	0.40	+1.1
1,272,820	-		Echvi_1109	0.40	+0.8
1,272,868	-		Echvi_1109	0.49	+0.5
1,272,873	+		Echvi_1109	0.50	-1.0
1,273,060	-		Echvi_1109	0.84	-0.6
1,273,160	+				+1.1
1,273,160	+				-1.6
1,273,161	-				+1.0
1,273,174	-				+1.3
1,273,174	-				+0.8
1,273,221	-		Echvi_1110	0.15	+0.5
1,273,221	-		Echvi_1110	0.15	+0.8
1,273,221	-		Echvi_1110	0.15	+0.6
1,273,237	+		Echvi_1110	0.18	+0.4
1,273,243	+		Echvi_1110	0.19	+0.1
1,273,315	+		Echvi_1110	0.30	-0.3
1,273,316	-		Echvi_1110	0.30	+2.4
1,273,316	-		Echvi_1110	0.30	+0.4
1,273,376	+		Echvi_1110	0.40	+0.7
1,273,376	+		Echvi_1110	0.40	-1.2
1,273,378	+		Echvi_1110	0.40	-1.2
1,273,397	-		Echvi_1110	0.43	+0.2
1,273,408	+		Echvi_1110	0.45	-0.3
1,273,409	-		Echvi_1110	0.45	-0.2
1,273,422	+		Echvi_1110	0.47	-0.1
1,273,423	-		Echvi_1110	0.48	+2.2
1,273,423	-		Echvi_1110	0.48	-0.4
1,273,491	-		Echvi_1110	0.58	+0.4
1,273,491	-		Echvi_1110	0.58	-0.0
1,273,507	+		Echvi_1110	0.61	-0.3
1,273,507	+		Echvi_1110	0.61	-1.1
1,273,507	+		Echvi_1110	0.61	-0.0
1,273,508	-		Echvi_1110	0.61	+2.3
1,273,535	-		Echvi_1110	0.66	+0.3
1,273,535	-		Echvi_1110	0.66	-1.2
1,273,561	+		Echvi_1110	0.70	-1.2