Experiment: m.b. Tetracycline 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0852 and Echvi_0853 are separated by 89 nucleotides Echvi_0853 and Echvi_0854 overlap by 1 nucleotides Echvi_0854 and Echvi_0855 are separated by 1 nucleotides Echvi_0855 and Echvi_0856 are separated by 116 nucleotides
Echvi_0852: Echvi_0852 - Parvulin-like peptidyl-prolyl isomerase, at 973,260 to 975,368
_0852
Echvi_0853: Echvi_0853 - Hemolysins and related proteins containing CBS domains, at 975,458 to 976,741
_0853
Echvi_0854: Echvi_0854 - hypothetical protein, at 976,741 to 976,953
_0854
Echvi_0855: Echvi_0855 - Protein of unknown function (DUF1239)., at 976,955 to 977,497
_0855
Echvi_0856: Echvi_0856 - hypothetical protein, at 977,614 to 978,918
_0856
Position (kb) 975
976
977 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 974.477 kb on + strand, within Echvi_0852 at 974.477 kb on + strand, within Echvi_0852 at 974.478 kb on - strand, within Echvi_0852 at 974.490 kb on + strand, within Echvi_0852 at 974.514 kb on + strand, within Echvi_0852 at 974.514 kb on + strand, within Echvi_0852 at 974.572 kb on - strand, within Echvi_0852 at 974.600 kb on - strand, within Echvi_0852 at 974.617 kb on + strand, within Echvi_0852 at 974.618 kb on - strand, within Echvi_0852 at 974.634 kb on - strand, within Echvi_0852 at 974.634 kb on - strand, within Echvi_0852 at 974.634 kb on - strand, within Echvi_0852 at 974.671 kb on + strand, within Echvi_0852 at 974.671 kb on + strand, within Echvi_0852 at 974.672 kb on - strand, within Echvi_0852 at 974.672 kb on - strand, within Echvi_0852 at 974.722 kb on + strand, within Echvi_0852 at 974.722 kb on + strand, within Echvi_0852 at 974.722 kb on + strand, within Echvi_0852 at 974.723 kb on - strand, within Echvi_0852 at 974.723 kb on - strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.725 kb on + strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.726 kb on - strand, within Echvi_0852 at 974.731 kb on - strand, within Echvi_0852 at 974.745 kb on + strand, within Echvi_0852 at 974.745 kb on + strand, within Echvi_0852 at 974.771 kb on + strand, within Echvi_0852 at 974.773 kb on + strand, within Echvi_0852 at 974.803 kb on + strand, within Echvi_0852 at 974.804 kb on - strand, within Echvi_0852 at 974.830 kb on + strand, within Echvi_0852 at 974.969 kb on + strand, within Echvi_0852 at 974.970 kb on - strand, within Echvi_0852 at 974.970 kb on - strand, within Echvi_0852 at 974.970 kb on - strand, within Echvi_0852 at 974.970 kb on - strand, within Echvi_0852 at 974.970 kb on - strand, within Echvi_0852 at 974.992 kb on - strand, within Echvi_0852 at 975.014 kb on + strand, within Echvi_0852 at 975.014 kb on + strand, within Echvi_0852 at 975.014 kb on + strand, within Echvi_0852 at 975.014 kb on + strand, within Echvi_0852 at 975.014 kb on + strand, within Echvi_0852 at 975.015 kb on - strand, within Echvi_0852 at 975.015 kb on - strand, within Echvi_0852 at 975.015 kb on - strand, within Echvi_0852 at 975.015 kb on - strand, within Echvi_0852 at 975.015 kb on - strand, within Echvi_0852 at 975.018 kb on + strand, within Echvi_0852 at 975.018 kb on + strand, within Echvi_0852 at 975.019 kb on - strand, within Echvi_0852 at 975.019 kb on - strand, within Echvi_0852 at 975.059 kb on - strand, within Echvi_0852 at 975.059 kb on - strand, within Echvi_0852 at 975.084 kb on + strand, within Echvi_0852 at 975.118 kb on + strand, within Echvi_0852 at 975.118 kb on + strand, within Echvi_0852 at 975.118 kb on + strand, within Echvi_0852 at 975.118 kb on + strand, within Echvi_0852 at 975.118 kb on + strand, within Echvi_0852 at 975.118 kb on + strand, within Echvi_0852 at 975.119 kb on - strand at 975.119 kb on - strand, within Echvi_0852 at 975.119 kb on - strand, within Echvi_0852 at 975.119 kb on - strand, within Echvi_0852 at 975.119 kb on - strand, within Echvi_0852 at 975.160 kb on + strand at 975.161 kb on - strand at 975.194 kb on - strand at 975.194 kb on - strand at 975.194 kb on - strand at 975.231 kb on + strand at 975.232 kb on - strand at 975.348 kb on - strand at 975.360 kb on + strand at 975.374 kb on + strand at 975.375 kb on - strand at 975.439 kb on - strand at 975.459 kb on + strand at 975.460 kb on - strand at 975.467 kb on + strand at 975.485 kb on - strand at 975.524 kb on - strand at 975.534 kb on + strand at 975.534 kb on + strand at 975.534 kb on + strand at 975.599 kb on - strand, within Echvi_0853 at 975.604 kb on - strand, within Echvi_0853 at 975.630 kb on + strand, within Echvi_0853 at 975.631 kb on - strand, within Echvi_0853 at 975.675 kb on + strand, within Echvi_0853 at 975.720 kb on + strand, within Echvi_0853 at 975.720 kb on + strand, within Echvi_0853 at 975.721 kb on - strand, within Echvi_0853 at 975.942 kb on + strand, within Echvi_0853 at 975.962 kb on - strand, within Echvi_0853 at 975.972 kb on + strand, within Echvi_0853 at 975.972 kb on + strand, within Echvi_0853 at 975.972 kb on + strand, within Echvi_0853 at 975.972 kb on + strand, within Echvi_0853 at 975.972 kb on + strand, within Echvi_0853 at 975.972 kb on + strand, within Echvi_0853 at 975.973 kb on - strand, within Echvi_0853 at 976.030 kb on + strand, within Echvi_0853 at 976.031 kb on - strand, within Echvi_0853 at 976.031 kb on - strand, within Echvi_0853 at 976.031 kb on - strand, within Echvi_0853 at 976.088 kb on + strand, within Echvi_0853 at 976.097 kb on - strand, within Echvi_0853 at 976.103 kb on + strand, within Echvi_0853 at 976.126 kb on + strand, within Echvi_0853 at 976.127 kb on - strand, within Echvi_0853 at 976.132 kb on + strand, within Echvi_0853 at 976.132 kb on + strand, within Echvi_0853 at 976.221 kb on + strand, within Echvi_0853 at 976.222 kb on - strand, within Echvi_0853 at 976.222 kb on - strand, within Echvi_0853 at 976.297 kb on - strand, within Echvi_0853 at 976.299 kb on + strand, within Echvi_0853 at 976.299 kb on + strand, within Echvi_0853 at 976.310 kb on - strand, within Echvi_0853 at 976.310 kb on - strand, within Echvi_0853 at 976.342 kb on + strand, within Echvi_0853 at 976.343 kb on - strand, within Echvi_0853 at 976.343 kb on - strand, within Echvi_0853 at 976.354 kb on + strand, within Echvi_0853 at 976.355 kb on - strand, within Echvi_0853 at 976.360 kb on + strand, within Echvi_0853 at 976.372 kb on + strand, within Echvi_0853 at 976.397 kb on - strand, within Echvi_0853 at 976.397 kb on - strand, within Echvi_0853 at 976.402 kb on + strand, within Echvi_0853 at 976.409 kb on + strand, within Echvi_0853 at 976.506 kb on + strand, within Echvi_0853 at 976.519 kb on + strand, within Echvi_0853 at 976.524 kb on + strand, within Echvi_0853 at 976.524 kb on + strand, within Echvi_0853 at 976.524 kb on + strand, within Echvi_0853 at 976.529 kb on + strand, within Echvi_0853 at 976.530 kb on - strand, within Echvi_0853 at 976.601 kb on + strand, within Echvi_0853 at 976.602 kb on - strand, within Echvi_0853 at 976.641 kb on - strand at 976.641 kb on - strand at 976.641 kb on - strand at 976.641 kb on - strand at 976.651 kb on + strand at 976.651 kb on + strand at 976.651 kb on + strand at 976.704 kb on - strand at 976.719 kb on + strand at 976.719 kb on + strand at 976.720 kb on - strand at 976.728 kb on + strand at 976.728 kb on + strand at 976.728 kb on + strand at 976.728 kb on + strand at 976.728 kb on + strand at 976.728 kb on + strand at 976.728 kb on + strand at 976.729 kb on - strand at 976.742 kb on + strand at 976.743 kb on - strand at 976.743 kb on - strand at 976.814 kb on + strand, within Echvi_0854 at 976.814 kb on + strand, within Echvi_0854 at 976.849 kb on - strand, within Echvi_0854 at 976.869 kb on + strand, within Echvi_0854 at 976.869 kb on + strand, within Echvi_0854 at 976.900 kb on + strand, within Echvi_0854 at 976.901 kb on - strand, within Echvi_0854 at 976.901 kb on - strand, within Echvi_0854 at 976.931 kb on - strand, within Echvi_0854 at 976.931 kb on - strand, within Echvi_0854 at 976.945 kb on + strand at 976.957 kb on - strand at 976.957 kb on - strand at 976.974 kb on - strand at 976.974 kb on - strand at 977.526 kb on - strand at 977.536 kb on - strand at 977.536 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.12 mg/ml remove 974,477 + Echvi_0852 0.58 -0.8 974,477 + Echvi_0852 0.58 -0.2 974,478 - Echvi_0852 0.58 -1.1 974,490 + Echvi_0852 0.58 -1.1 974,514 + Echvi_0852 0.59 -0.4 974,514 + Echvi_0852 0.59 -0.5 974,572 - Echvi_0852 0.62 +0.9 974,600 - Echvi_0852 0.64 -1.5 974,617 + Echvi_0852 0.64 -0.1 974,618 - Echvi_0852 0.64 +0.2 974,634 - Echvi_0852 0.65 -1.2 974,634 - Echvi_0852 0.65 -0.5 974,634 - Echvi_0852 0.65 -1.0 974,671 + Echvi_0852 0.67 -1.4 974,671 + Echvi_0852 0.67 -0.9 974,672 - Echvi_0852 0.67 -1.8 974,672 - Echvi_0852 0.67 -0.6 974,722 + Echvi_0852 0.69 -1.3 974,722 + Echvi_0852 0.69 +0.1 974,722 + Echvi_0852 0.69 -0.6 974,723 - Echvi_0852 0.69 -0.5 974,723 - Echvi_0852 0.69 -1.5 974,725 + Echvi_0852 0.69 -1.8 974,725 + Echvi_0852 0.69 -1.5 974,725 + Echvi_0852 0.69 +0.4 974,725 + Echvi_0852 0.69 -1.3 974,725 + Echvi_0852 0.69 -1.4 974,725 + Echvi_0852 0.69 -0.8 974,725 + Echvi_0852 0.69 -0.2 974,726 - Echvi_0852 0.70 -0.9 974,726 - Echvi_0852 0.70 -0.3 974,726 - Echvi_0852 0.70 -2.3 974,726 - Echvi_0852 0.70 +0.0 974,726 - Echvi_0852 0.70 -1.3 974,726 - Echvi_0852 0.70 -0.4 974,726 - Echvi_0852 0.70 -1.6 974,726 - Echvi_0852 0.70 -1.3 974,726 - Echvi_0852 0.70 -1.1 974,731 - Echvi_0852 0.70 -0.8 974,745 + Echvi_0852 0.70 -0.9 974,745 + Echvi_0852 0.70 -0.7 974,771 + Echvi_0852 0.72 -0.3 974,773 + Echvi_0852 0.72 -1.1 974,803 + Echvi_0852 0.73 -0.5 974,804 - Echvi_0852 0.73 -0.2 974,830 + Echvi_0852 0.74 -1.2 974,969 + Echvi_0852 0.81 -0.5 974,970 - Echvi_0852 0.81 -0.9 974,970 - Echvi_0852 0.81 -1.7 974,970 - Echvi_0852 0.81 -1.4 974,970 - Echvi_0852 0.81 +0.1 974,970 - Echvi_0852 0.81 -1.3 974,992 - Echvi_0852 0.82 -0.8 975,014 + Echvi_0852 0.83 -1.2 975,014 + Echvi_0852 0.83 -1.7 975,014 + Echvi_0852 0.83 -0.5 975,014 + Echvi_0852 0.83 -1.9 975,014 + Echvi_0852 0.83 +0.3 975,015 - Echvi_0852 0.83 -1.9 975,015 - Echvi_0852 0.83 -1.5 975,015 - Echvi_0852 0.83 -1.9 975,015 - Echvi_0852 0.83 -1.1 975,015 - Echvi_0852 0.83 -0.3 975,018 + Echvi_0852 0.83 -0.8 975,018 + Echvi_0852 0.83 -1.3 975,019 - Echvi_0852 0.83 -1.5 975,019 - Echvi_0852 0.83 -1.3 975,059 - Echvi_0852 0.85 -1.8 975,059 - Echvi_0852 0.85 +0.5 975,084 + Echvi_0852 0.86 -1.3 975,118 + Echvi_0852 0.88 -1.5 975,118 + Echvi_0852 0.88 -0.3 975,118 + Echvi_0852 0.88 -1.5 975,118 + Echvi_0852 0.88 -0.4 975,118 + Echvi_0852 0.88 -1.4 975,118 + Echvi_0852 0.88 -2.9 975,119 - +0.1 975,119 - Echvi_0852 0.88 +1.7 975,119 - Echvi_0852 0.88 -0.4 975,119 - Echvi_0852 0.88 -1.5 975,119 - Echvi_0852 0.88 -0.9 975,160 + -1.8 975,161 - -0.9 975,194 - -0.9 975,194 - -1.0 975,194 - +0.2 975,231 + -1.5 975,232 - -1.3 975,348 - -1.6 975,360 + -1.0 975,374 + -1.2 975,375 - -1.0 975,439 - -0.0 975,459 + -0.1 975,460 - +0.5 975,467 + +0.7 975,485 - -2.3 975,524 - -0.6 975,534 + -2.1 975,534 + -1.5 975,534 + -0.5 975,599 - Echvi_0853 0.11 -1.1 975,604 - Echvi_0853 0.11 +0.1 975,630 + Echvi_0853 0.13 -0.8 975,631 - Echvi_0853 0.13 -1.2 975,675 + Echvi_0853 0.17 -1.8 975,720 + Echvi_0853 0.20 -1.0 975,720 + Echvi_0853 0.20 -1.6 975,721 - Echvi_0853 0.20 +1.1 975,942 + Echvi_0853 0.38 -0.3 975,962 - Echvi_0853 0.39 -2.7 975,972 + Echvi_0853 0.40 -0.8 975,972 + Echvi_0853 0.40 -1.1 975,972 + Echvi_0853 0.40 -0.8 975,972 + Echvi_0853 0.40 -2.3 975,972 + Echvi_0853 0.40 -1.3 975,972 + Echvi_0853 0.40 -0.7 975,973 - Echvi_0853 0.40 -1.9 976,030 + Echvi_0853 0.45 -1.8 976,031 - Echvi_0853 0.45 -0.1 976,031 - Echvi_0853 0.45 -1.1 976,031 - Echvi_0853 0.45 -0.3 976,088 + Echvi_0853 0.49 +1.1 976,097 - Echvi_0853 0.50 -1.3 976,103 + Echvi_0853 0.50 -2.0 976,126 + Echvi_0853 0.52 -1.6 976,127 - Echvi_0853 0.52 -1.6 976,132 + Echvi_0853 0.52 +0.3 976,132 + Echvi_0853 0.52 -2.9 976,221 + Echvi_0853 0.59 -1.3 976,222 - Echvi_0853 0.60 -0.9 976,222 - Echvi_0853 0.60 -1.1 976,297 - Echvi_0853 0.65 -2.0 976,299 + Echvi_0853 0.65 -0.7 976,299 + Echvi_0853 0.65 -1.2 976,310 - Echvi_0853 0.66 -1.5 976,310 - Echvi_0853 0.66 -2.0 976,342 + Echvi_0853 0.69 -1.6 976,343 - Echvi_0853 0.69 -1.5 976,343 - Echvi_0853 0.69 -1.5 976,354 + Echvi_0853 0.70 -1.3 976,355 - Echvi_0853 0.70 -2.9 976,360 + Echvi_0853 0.70 +1.0 976,372 + Echvi_0853 0.71 -1.8 976,397 - Echvi_0853 0.73 -1.3 976,397 - Echvi_0853 0.73 -1.4 976,402 + Echvi_0853 0.74 +0.9 976,409 + Echvi_0853 0.74 -1.1 976,506 + Echvi_0853 0.82 +0.7 976,519 + Echvi_0853 0.83 -1.8 976,524 + Echvi_0853 0.83 -2.0 976,524 + Echvi_0853 0.83 -0.6 976,524 + Echvi_0853 0.83 -1.0 976,529 + Echvi_0853 0.83 -2.8 976,530 - Echvi_0853 0.83 -1.5 976,601 + Echvi_0853 0.89 -1.0 976,602 - Echvi_0853 0.89 -1.2 976,641 - -1.1 976,641 - -2.1 976,641 - -2.8 976,641 - -0.4 976,651 + -2.3 976,651 + +0.5 976,651 + -1.5 976,704 - -1.8 976,719 + -0.5 976,719 + -0.4 976,720 - -2.1 976,728 + -3.5 976,728 + -0.5 976,728 + -2.1 976,728 + -1.5 976,728 + -1.0 976,728 + -1.3 976,728 + -3.1 976,729 - -0.8 976,742 + -0.6 976,743 - -1.1 976,743 - -1.3 976,814 + Echvi_0854 0.34 +1.4 976,814 + Echvi_0854 0.34 -0.3 976,849 - Echvi_0854 0.51 -0.5 976,869 + Echvi_0854 0.60 -0.7 976,869 + Echvi_0854 0.60 +0.2 976,900 + Echvi_0854 0.75 -0.5 976,901 - Echvi_0854 0.75 -1.8 976,901 - Echvi_0854 0.75 +1.4 976,931 - Echvi_0854 0.89 +0.6 976,931 - Echvi_0854 0.89 -1.3 976,945 + -1.3 976,957 - -2.2 976,957 - -1.9 976,974 - -0.5 976,974 - -1.9 977,526 - -1.4 977,536 - -1.1 977,536 - -0.7
Or see this region's nucleotide sequence