Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0140

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
139,516	+		Echvi_0139	0.32	-1.2
139,517	-		Echvi_0139	0.32	+0.6
139,517	-		Echvi_0139	0.32	-2.1
139,519	+		Echvi_0139	0.32	-1.5
139,519	+		Echvi_0139	0.32	-0.1
139,519	+		Echvi_0139	0.32	-0.7
139,520	-		Echvi_0139	0.32	-0.7
139,523	+		Echvi_0139	0.32	-2.2
139,563	+		Echvi_0139	0.35	-1.7
139,564	-		Echvi_0139	0.35	+0.4
139,619	+		Echvi_0139	0.39	-1.9
139,619	+		Echvi_0139	0.39	+0.6
139,619	+		Echvi_0139	0.39	-0.4
139,620	-		Echvi_0139	0.39	-0.9
139,736	+		Echvi_0139	0.47	+0.1
139,736	+		Echvi_0139	0.47	-0.4
139,737	-		Echvi_0139	0.47	-0.2
139,774	-		Echvi_0139	0.49	-1.2
139,774	-		Echvi_0139	0.49	-0.6
139,804	-		Echvi_0139	0.51	-0.1
139,804	-		Echvi_0139	0.51	-1.1
139,805	+		Echvi_0139	0.51	-0.8
139,805	+		Echvi_0139	0.51	+1.6
139,806	-		Echvi_0139	0.51	-2.6
139,806	-		Echvi_0139	0.51	-1.4
139,806	-		Echvi_0139	0.51	-1.2
139,806	-		Echvi_0139	0.51	-0.8
139,807	+		Echvi_0139	0.51	-1.1
139,807	+		Echvi_0139	0.51	+0.0
139,807	+		Echvi_0139	0.51	-1.3
139,808	-		Echvi_0139	0.51	+0.1
139,808	-		Echvi_0139	0.51	+0.1
139,808	-		Echvi_0139	0.51	-1.8
139,808	-		Echvi_0139	0.51	-0.5
139,848	-		Echvi_0139	0.54	-1.6
139,872	-		Echvi_0139	0.56	-0.3
139,902	+		Echvi_0139	0.58	-2.9
139,911	+		Echvi_0139	0.58	-0.2
139,913	+		Echvi_0139	0.59	+0.5
139,913	+		Echvi_0139	0.59	+0.5
139,913	+		Echvi_0139	0.59	-0.2
139,913	+		Echvi_0139	0.59	-1.3
139,913	+		Echvi_0139	0.59	+0.2
139,914	-		Echvi_0139	0.59	-0.5
139,914	-		Echvi_0139	0.59	-0.8
139,914	-		Echvi_0139	0.59	-0.9
139,914	-		Echvi_0139	0.59	-0.1
139,951	+		Echvi_0139	0.61	+0.8
139,951	+		Echvi_0139	0.61	+0.2
139,986	-		Echvi_0139	0.63	-0.4
139,996	+		Echvi_0139	0.64	-1.2
140,000	+		Echvi_0139	0.64	+0.0
140,059	+		Echvi_0139	0.68	+0.5
140,060	-		Echvi_0139	0.68	-0.9
140,063	+		Echvi_0139	0.69	-1.9
140,063	+		Echvi_0139	0.69	-0.7
140,064	-		Echvi_0139	0.69	-0.1
140,064	-		Echvi_0139	0.69	-1.4
140,076	+		Echvi_0139	0.70	-1.6
140,154	+		Echvi_0139	0.75	-0.3
140,155	-		Echvi_0139	0.75	-0.2
140,159	+		Echvi_0139	0.75	-0.4
140,285	-		Echvi_0139	0.84	+1.5
140,296	-		Echvi_0139	0.84	+0.2
140,306	-		Echvi_0139	0.85	-0.6
140,329	+		Echvi_0139	0.87	-1.7
140,330	-		Echvi_0139	0.87	-0.9
140,389	-				-0.1
140,392	+				-1.9
140,392	+				+0.2
140,395	+				-2.6
140,395	+				+1.1
140,395	+				-0.3
140,396	-				+0.0
140,396	-				-1.9
140,396	-				-0.0
140,396	-				-2.8
140,396	-				+0.3
140,396	-				-1.1
140,396	-				-0.6
140,399	+				-0.2
140,400	-				-1.2
140,434	+				-0.4
140,438	+				-0.5
140,439	-				-1.3
140,441	+				-0.4
140,441	+				-0.9
140,441	+				-1.5
140,470	+				+0.5
140,474	-				+0.4
140,503	-				-1.4
140,515	+				-1.4
140,565	-				+0.8
141,075	-				-0.5
141,131	+				+0.6
141,131	+				+0.4
141,132	-				+0.4
141,172	+		Echvi_0141	0.12	-0.4
141,186	+		Echvi_0141	0.13	+1.3
141,186	+		Echvi_0141	0.13	-0.8
141,186	+		Echvi_0141	0.13	+0.2
141,187	-		Echvi_0141	0.13	-0.6
141,190	-		Echvi_0141	0.13	-0.5
141,190	-		Echvi_0141	0.13	-1.0
141,251	-		Echvi_0141	0.19	+0.6
141,253	+		Echvi_0141	0.19	-0.2
141,331	+		Echvi_0141	0.26	-0.8
141,331	+		Echvi_0141	0.26	+0.6
141,331	+		Echvi_0141	0.26	+0.0
141,332	-		Echvi_0141	0.26	-1.3
141,332	-		Echvi_0141	0.26	+0.7
141,332	-		Echvi_0141	0.26	+1.0
141,480	+		Echvi_0141	0.40	+1.6
141,520	+		Echvi_0141	0.44	+0.6
141,520	+		Echvi_0141	0.44	+0.3
141,522	+		Echvi_0141	0.44	-0.6
141,522	+		Echvi_0141	0.44	-1.5
141,523	-		Echvi_0141	0.44	-1.5
141,565	+		Echvi_0141	0.48	+0.8
141,605	+		Echvi_0141	0.51	+0.9
141,753	+		Echvi_0141	0.65	+0.3
141,831	+		Echvi_0141	0.72	-0.1
141,872	+		Echvi_0141	0.76	-0.0
141,873	-		Echvi_0141	0.76	-1.7
141,921	-		Echvi_0141	0.80	+0.4
141,921	-		Echvi_0141	0.80	+0.6
141,941	+		Echvi_0141	0.82	+0.3
141,941	+		Echvi_0141	0.82	+0.6
141,942	-		Echvi_0141	0.82	+0.6
141,942	-		Echvi_0141	0.82	+1.1
141,942	-		Echvi_0141	0.82	-0.3
141,973	+		Echvi_0141	0.85	+0.6
141,973	+		Echvi_0141	0.85	+1.3
141,997	+		Echvi_0141	0.87	+0.7
142,033	+				+0.1