Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt UW163_RS18580 and UW163_RS18585 are separated by 77 nucleotides UW163_RS18585 and UW163_RS18590 are separated by 261 nucleotides UW163_RS18590 and UW163_RS18595 are separated by 30 nucleotides
UW163_RS18580: UW163_RS18580 - alkene reductase, at 573,976 to 575,085
_RS18580
UW163_RS18585: UW163_RS18585 - epimerase, at 575,163 to 575,813
_RS18585
UW163_RS18590: UW163_RS18590 - DUF2784 domain-containing protein, at 576,075 to 576,443
_RS18590
UW163_RS18595: UW163_RS18595 - transcriptional regulator, at 576,474 to 576,905
_RS18595
Position (kb) 575
576 Strain fitness (log2 ratio) -2
-1
0
1
2 at 574.247 kb on + strand, within UW163_RS18580 at 574.247 kb on + strand, within UW163_RS18580 at 574.248 kb on - strand, within UW163_RS18580 at 574.248 kb on - strand, within UW163_RS18580 at 574.403 kb on - strand, within UW163_RS18580 at 574.456 kb on + strand, within UW163_RS18580 at 574.525 kb on + strand, within UW163_RS18580 at 574.525 kb on + strand, within UW163_RS18580 at 574.572 kb on + strand, within UW163_RS18580 at 574.573 kb on - strand, within UW163_RS18580 at 574.573 kb on - strand, within UW163_RS18580 at 574.573 kb on - strand, within UW163_RS18580 at 574.573 kb on - strand, within UW163_RS18580 at 574.576 kb on + strand, within UW163_RS18580 at 574.576 kb on + strand, within UW163_RS18580 at 574.576 kb on + strand, within UW163_RS18580 at 574.577 kb on - strand, within UW163_RS18580 at 574.577 kb on - strand, within UW163_RS18580 at 574.577 kb on - strand, within UW163_RS18580 at 574.577 kb on - strand, within UW163_RS18580 at 574.687 kb on + strand, within UW163_RS18580 at 574.687 kb on + strand, within UW163_RS18580 at 574.687 kb on + strand, within UW163_RS18580 at 574.687 kb on + strand, within UW163_RS18580 at 574.687 kb on + strand, within UW163_RS18580 at 574.687 kb on + strand, within UW163_RS18580 at 574.688 kb on - strand, within UW163_RS18580 at 574.723 kb on + strand, within UW163_RS18580 at 574.729 kb on + strand, within UW163_RS18580 at 574.730 kb on - strand, within UW163_RS18580 at 574.754 kb on + strand, within UW163_RS18580 at 574.766 kb on - strand, within UW163_RS18580 at 574.766 kb on - strand, within UW163_RS18580 at 574.835 kb on + strand, within UW163_RS18580 at 574.835 kb on + strand, within UW163_RS18580 at 574.835 kb on + strand at 574.835 kb on + strand, within UW163_RS18580 at 574.835 kb on + strand, within UW163_RS18580 at 574.835 kb on + strand, within UW163_RS18580 at 574.835 kb on + strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.836 kb on - strand, within UW163_RS18580 at 574.948 kb on - strand, within UW163_RS18580 at 574.965 kb on - strand, within UW163_RS18580 at 574.965 kb on - strand, within UW163_RS18580 at 575.020 kb on + strand at 575.020 kb on + strand at 575.020 kb on + strand at 575.021 kb on - strand at 575.021 kb on - strand at 575.021 kb on - strand at 575.021 kb on - strand at 575.021 kb on - strand at 575.041 kb on + strand at 575.042 kb on - strand at 575.042 kb on - strand at 575.042 kb on - strand at 575.155 kb on + strand at 575.155 kb on + strand at 575.155 kb on + strand at 575.155 kb on + strand at 575.155 kb on + strand at 575.155 kb on + strand at 575.156 kb on - strand at 575.156 kb on - strand at 575.156 kb on - strand at 575.162 kb on + strand at 575.163 kb on - strand at 575.163 kb on - strand at 575.180 kb on - strand at 575.180 kb on - strand at 575.409 kb on + strand, within UW163_RS18585 at 575.409 kb on + strand, within UW163_RS18585 at 575.410 kb on - strand, within UW163_RS18585 at 575.582 kb on + strand, within UW163_RS18585 at 575.583 kb on - strand, within UW163_RS18585 at 575.583 kb on - strand, within UW163_RS18585 at 575.583 kb on - strand, within UW163_RS18585 at 575.628 kb on + strand, within UW163_RS18585 at 575.628 kb on + strand, within UW163_RS18585 at 575.628 kb on + strand, within UW163_RS18585 at 575.629 kb on - strand, within UW163_RS18585 at 575.629 kb on - strand, within UW163_RS18585 at 575.629 kb on - strand, within UW163_RS18585 at 575.629 kb on - strand, within UW163_RS18585 at 575.629 kb on - strand, within UW163_RS18585 at 575.743 kb on - strand, within UW163_RS18585 at 575.743 kb on - strand, within UW163_RS18585 at 575.743 kb on - strand, within UW163_RS18585 at 575.812 kb on - strand at 575.812 kb on - strand at 575.862 kb on + strand at 576.133 kb on + strand, within UW163_RS18590 at 576.134 kb on - strand, within UW163_RS18590 at 576.166 kb on + strand, within UW163_RS18590 at 576.166 kb on + strand, within UW163_RS18590 at 576.166 kb on + strand, within UW163_RS18590 at 576.167 kb on - strand, within UW163_RS18590 at 576.167 kb on - strand, within UW163_RS18590 at 576.167 kb on - strand, within UW163_RS18590 at 576.169 kb on + strand, within UW163_RS18590 at 576.169 kb on + strand, within UW163_RS18590 at 576.169 kb on + strand, within UW163_RS18590 at 576.170 kb on - strand, within UW163_RS18590 at 576.799 kb on + strand, within UW163_RS18595 at 576.800 kb on - strand, within UW163_RS18595 at 576.800 kb on - strand, within UW163_RS18595 at 576.800 kb on - strand, within UW163_RS18595 at 576.800 kb on - strand, within UW163_RS18595
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 574,247 + UW163_RS18580 0.24 -0.9 574,247 + UW163_RS18580 0.24 +0.2 574,248 - UW163_RS18580 0.25 +1.0 574,248 - UW163_RS18580 0.25 -1.5 574,403 - UW163_RS18580 0.38 +0.6 574,456 + UW163_RS18580 0.43 -1.8 574,525 + UW163_RS18580 0.49 -0.0 574,525 + UW163_RS18580 0.49 +0.2 574,572 + UW163_RS18580 0.54 +1.1 574,573 - UW163_RS18580 0.54 -0.2 574,573 - UW163_RS18580 0.54 +0.1 574,573 - UW163_RS18580 0.54 -0.4 574,573 - UW163_RS18580 0.54 -0.9 574,576 + UW163_RS18580 0.54 +1.6 574,576 + UW163_RS18580 0.54 -0.2 574,576 + UW163_RS18580 0.54 +0.1 574,577 - UW163_RS18580 0.54 -0.3 574,577 - UW163_RS18580 0.54 -0.2 574,577 - UW163_RS18580 0.54 -0.7 574,577 - UW163_RS18580 0.54 +0.5 574,687 + UW163_RS18580 0.64 +0.5 574,687 + UW163_RS18580 0.64 +1.1 574,687 + UW163_RS18580 0.64 -0.2 574,687 + UW163_RS18580 0.64 +1.1 574,687 + UW163_RS18580 0.64 -0.0 574,687 + UW163_RS18580 0.64 +0.5 574,688 - UW163_RS18580 0.64 +0.1 574,723 + UW163_RS18580 0.67 -0.3 574,729 + UW163_RS18580 0.68 -0.4 574,730 - UW163_RS18580 0.68 +0.5 574,754 + UW163_RS18580 0.70 +1.5 574,766 - UW163_RS18580 0.71 +0.6 574,766 - UW163_RS18580 0.71 -0.8 574,835 + UW163_RS18580 0.77 -0.1 574,835 + UW163_RS18580 0.77 +0.7 574,835 + -0.0 574,835 + UW163_RS18580 0.77 +0.5 574,835 + UW163_RS18580 0.77 +0.5 574,835 + UW163_RS18580 0.77 -0.5 574,835 + UW163_RS18580 0.77 -1.0 574,836 - UW163_RS18580 0.77 +0.6 574,836 - UW163_RS18580 0.77 +0.3 574,836 - UW163_RS18580 0.77 +2.3 574,836 - UW163_RS18580 0.77 +0.5 574,836 - UW163_RS18580 0.77 +1.1 574,836 - UW163_RS18580 0.77 -0.0 574,836 - UW163_RS18580 0.77 +1.1 574,836 - UW163_RS18580 0.77 +0.8 574,948 - UW163_RS18580 0.88 +0.9 574,965 - UW163_RS18580 0.89 +0.1 574,965 - UW163_RS18580 0.89 +0.9 575,020 + +0.1 575,020 + +0.6 575,020 + +0.4 575,021 - +1.1 575,021 - +1.0 575,021 - +0.3 575,021 - +0.9 575,021 - -0.8 575,041 + -0.2 575,042 - -2.0 575,042 - -1.6 575,042 - +0.2 575,155 + +0.4 575,155 + -0.0 575,155 + +0.5 575,155 + -0.9 575,155 + -0.1 575,155 + +2.3 575,156 - +0.4 575,156 - +0.6 575,156 - +0.6 575,162 + -0.0 575,163 - +0.2 575,163 - +0.3 575,180 - -0.0 575,180 - +0.8 575,409 + UW163_RS18585 0.38 +0.3 575,409 + UW163_RS18585 0.38 +0.0 575,410 - UW163_RS18585 0.38 +0.4 575,582 + UW163_RS18585 0.64 +0.2 575,583 - UW163_RS18585 0.65 +0.3 575,583 - UW163_RS18585 0.65 +0.5 575,583 - UW163_RS18585 0.65 +0.1 575,628 + UW163_RS18585 0.71 -1.4 575,628 + UW163_RS18585 0.71 +0.6 575,628 + UW163_RS18585 0.71 -2.6 575,629 - UW163_RS18585 0.72 -0.0 575,629 - UW163_RS18585 0.72 -0.2 575,629 - UW163_RS18585 0.72 -0.8 575,629 - UW163_RS18585 0.72 +0.8 575,629 - UW163_RS18585 0.72 -0.3 575,743 - UW163_RS18585 0.89 +2.0 575,743 - UW163_RS18585 0.89 -0.4 575,743 - UW163_RS18585 0.89 +0.4 575,812 - -1.0 575,812 - +0.5 575,862 + -1.0 576,133 + UW163_RS18590 0.16 -1.0 576,134 - UW163_RS18590 0.16 -0.0 576,166 + UW163_RS18590 0.25 +1.0 576,166 + UW163_RS18590 0.25 -0.3 576,166 + UW163_RS18590 0.25 -0.2 576,167 - UW163_RS18590 0.25 -0.1 576,167 - UW163_RS18590 0.25 +0.5 576,167 - UW163_RS18590 0.25 +1.6 576,169 + UW163_RS18590 0.25 +0.1 576,169 + UW163_RS18590 0.25 +1.0 576,169 + UW163_RS18590 0.25 -0.6 576,170 - UW163_RS18590 0.26 +0.8 576,799 + UW163_RS18595 0.75 +1.0 576,800 - UW163_RS18595 0.75 +2.6 576,800 - UW163_RS18595 0.75 +0.3 576,800 - UW163_RS18595 0.75 +0.9 576,800 - UW163_RS18595 0.75 +1.0
Or see this region's nucleotide sequence