Strain Fitness in Ralstonia solanacearum UW163 around UW163_RS11155

Experiment: M63_quarter_strength

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntUW163_RS11145 and UW163_RS11150 are separated by 14 nucleotidesUW163_RS11150 and UW163_RS11155 are separated by 37 nucleotidesUW163_RS11155 and UW163_RS11160 are separated by 82 nucleotides UW163_RS11145: UW163_RS11145 - site-specific DNA-methyltransferase, at 2,409,721 to 2,410,539 _RS11145 UW163_RS11150: UW163_RS11150 - tryptophan synthase subunit alpha, at 2,410,554 to 2,411,351 _RS11150 UW163_RS11155: UW163_RS11155 - acetyl-CoA carboxylase carboxyltransferase subunit beta, at 2,411,389 to 2,412,261 _RS11155 UW163_RS11160: UW163_RS11160 - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 2,412,344 to 2,413,654 _RS11160 Position (kb) 2411 2412 2413Strain fitness (log2 ratio) -3 -2 -1 0 1at 2410.549 kb on + strandat 2411.079 kb on + strand, within UW163_RS11150

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Per-strain Table

Position Strand Gene LocusTag Fraction M63_quarter_strength
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2,410,549 + +0.7
2,411,079 + UW163_RS11150 0.66 -3.0

Or see this region's nucleotide sequence