Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4560

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
5,457,685	-		Echvi_4559	0.17	+0.2
5,457,739	-		Echvi_4559	0.22	+0.3
5,457,771	-		Echvi_4559	0.25	+0.2
5,457,849	+		Echvi_4559	0.32	-0.4
5,457,871	-		Echvi_4559	0.33	+0.2
5,457,875	-		Echvi_4559	0.34	+0.4
5,457,875	-		Echvi_4559	0.34	+0.5
5,458,028	-		Echvi_4559	0.47	-0.6
5,458,101	+		Echvi_4559	0.53	+1.9
5,458,224	+		Echvi_4559	0.64	+1.0
5,458,366	-		Echvi_4559	0.76	+0.3
5,458,498	-		Echvi_4559	0.88	+1.4
5,458,498	-		Echvi_4559	0.88	+0.3
5,458,498	-		Echvi_4559	0.88	-0.0
5,458,553	+				-0.7
5,458,554	-				+0.4
5,458,696	+				-0.1
5,458,697	-				-0.3
5,458,697	-				-0.3
5,458,749	+		Echvi_4560	0.16	+0.9
5,458,764	+		Echvi_4560	0.18	-0.1
5,458,764	+		Echvi_4560	0.18	-1.2
5,458,970	+		Echvi_4560	0.49	-0.8
5,458,970	+		Echvi_4560	0.49	+0.2
5,458,970	+		Echvi_4560	0.49	-1.1
5,458,971	-		Echvi_4560	0.49	-0.3
5,458,971	-		Echvi_4560	0.49	-1.9
5,458,971	-		Echvi_4560	0.49	+0.9
5,458,978	-		Echvi_4560	0.50	-0.5
5,458,991	+		Echvi_4560	0.52	+1.1
5,458,991	+		Echvi_4560	0.52	-0.3
5,459,127	+		Echvi_4560	0.72	-0.6
5,459,127	+		Echvi_4560	0.72	+1.0
5,459,128	-		Echvi_4560	0.72	-0.1
5,459,128	-		Echvi_4560	0.72	-0.4
5,459,278	+				-0.4
5,459,278	+				+0.5
5,459,278	+				-2.0
5,459,279	-				-0.2
5,459,385	-				+0.7
5,459,471	-				+0.1
5,459,522	+				-0.2
5,459,523	-				-0.1
5,459,624	+				+0.6
5,459,625	-				+2.0
5,459,689	+				+0.4
5,459,689	+				-0.2
5,459,690	-				-0.5
5,459,690	-				-1.5
5,459,690	-				-0.6
5,459,692	+				-0.7
5,459,692	+				-1.6
5,459,714	+				+0.8
5,459,715	-				+0.9
5,459,715	-				+0.3
5,459,715	-				+0.2
5,459,719	+				-0.3
5,459,719	+				-0.1
5,459,726	+				+0.6
5,459,726	+				-0.6
5,459,727	-				-0.0
5,459,727	-				-0.5
5,459,727	-				+0.8
5,459,730	-				-0.8
5,459,821	+		Echvi_4561	0.33	-0.4
5,459,852	-		Echvi_4561	0.49	+0.8
5,459,895	-		Echvi_4561	0.71	-1.3
5,459,922	+				+0.2
5,459,922	+				-0.7
5,459,923	-				+0.1
5,459,948	+				+0.0
5,459,948	+				+0.2
5,459,953	+				-0.2
5,459,953	+				-0.5
5,459,954	-				-0.3
5,459,954	-				+1.3
5,459,957	-				-0.2
5,460,076	+		Echvi_4562	0.24	+0.2
5,460,077	-		Echvi_4562	0.24	-2.1