Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4410

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
5,272,643	+		Echvi_4409	0.30	+1.5
5,272,643	+		Echvi_4409	0.30	-1.3
5,272,643	+		Echvi_4409	0.30	+1.7
5,272,644	-		Echvi_4409	0.30	-0.1
5,272,721	+		Echvi_4409	0.37	-1.7
5,272,721	+		Echvi_4409	0.37	-1.4
5,272,721	+		Echvi_4409	0.37	-0.7
5,272,726	-		Echvi_4409	0.38	-0.7
5,272,726	-		Echvi_4409	0.38	-0.7
5,272,726	-		Echvi_4409	0.38	-0.0
5,272,755	+		Echvi_4409	0.40	-0.2
5,272,883	+		Echvi_4409	0.52	+0.4
5,272,884	-		Echvi_4409	0.52	+1.1
5,272,910	-		Echvi_4409	0.55	-0.4
5,272,938	-		Echvi_4409	0.57	-0.9
5,272,970	-		Echvi_4409	0.60	-1.5
5,272,998	-		Echvi_4409	0.63	+0.9
5,272,998	-		Echvi_4409	0.63	-0.1
5,272,998	-		Echvi_4409	0.63	+0.4
5,273,032	+		Echvi_4409	0.66	+0.1
5,273,032	+		Echvi_4409	0.66	-0.8
5,273,077	+		Echvi_4409	0.70	-0.0
5,273,077	+		Echvi_4409	0.70	+0.6
5,273,078	-		Echvi_4409	0.70	+0.1
5,273,187	+		Echvi_4409	0.80	+0.5
5,273,187	+		Echvi_4409	0.80	+0.1
5,273,187	+		Echvi_4409	0.80	-0.6
5,273,188	-		Echvi_4409	0.80	+1.5
5,273,188	-		Echvi_4409	0.80	+0.1
5,273,188	-		Echvi_4409	0.80	-0.4
5,273,435	-				-0.2
5,273,441	+				+1.2
5,273,445	-				-1.3
5,273,486	+				+0.6
5,273,486	+				+0.9
5,273,493	+				+0.0
5,273,493	+				+0.0
5,273,493	+				-0.5
5,273,494	-				+0.4
5,273,498	+				-0.4
5,273,498	+				+0.3
5,273,498	+				-0.1
5,273,498	+				+0.2
5,273,499	-				-0.2
5,273,499	-				+1.5
5,273,526	+				+1.1
5,273,624	+		Echvi_4410	0.14	-0.1
5,273,624	+		Echvi_4410	0.14	+1.1
5,273,625	-		Echvi_4410	0.14	-0.6
5,273,639	+		Echvi_4410	0.15	-0.0
5,273,639	+		Echvi_4410	0.15	+0.3
5,273,660	+		Echvi_4410	0.16	-0.8
5,273,661	-		Echvi_4410	0.17	-0.8
5,273,661	-		Echvi_4410	0.17	-0.1
5,273,696	+		Echvi_4410	0.19	-0.1
5,273,697	-		Echvi_4410	0.19	-1.3
5,273,918	+		Echvi_4410	0.36	+0.5
5,273,918	+		Echvi_4410	0.36	-0.5
5,273,918	+		Echvi_4410	0.36	-0.9
5,273,991	-		Echvi_4410	0.42	-0.9
5,273,991	-		Echvi_4410	0.42	-0.0
5,274,042	+		Echvi_4410	0.45	-1.1
5,274,058	+		Echvi_4410	0.47	+1.5
5,274,128	+		Echvi_4410	0.52	-0.4
5,274,129	-		Echvi_4410	0.52	-0.9
5,274,161	+		Echvi_4410	0.55	+0.2
5,274,162	-		Echvi_4410	0.55	-1.3
5,274,198	-		Echvi_4410	0.57	-0.8
5,274,371	-		Echvi_4410	0.70	-0.4
5,274,375	+		Echvi_4410	0.71	-0.5
5,274,399	+		Echvi_4410	0.73	+0.4
5,274,420	+		Echvi_4410	0.74	-0.3
5,274,422	+		Echvi_4410	0.74	+0.1
5,274,422	+		Echvi_4410	0.74	-1.2
5,274,540	+		Echvi_4410	0.83	+0.0
5,274,585	-		Echvi_4410	0.87	+0.3
5,274,621	-		Echvi_4410	0.89	+0.1
5,274,727	+				+0.8
5,274,728	-				+0.3
5,274,728	-				+0.3
5,274,728	-				+1.0
5,274,728	-				-0.3
5,274,742	+				-0.8
5,274,743	-				+2.3
5,274,745	+				+0.5
5,274,750	+				+0.7
5,274,773	-				+0.1
5,274,783	+				-0.3
5,274,783	+				+0.2
5,274,784	-				-0.3
5,274,798	-				+0.5
5,274,799	+				+0.8
5,274,802	+				-0.1
5,274,802	+				-0.5
5,274,802	+				-0.3
5,274,802	+				+0.3
5,274,859	+				+1.9
5,275,061	-		Echvi_4411	0.15	-0.9
5,275,061	-		Echvi_4411	0.15	-0.8
5,275,061	-		Echvi_4411	0.15	-1.1
5,275,193	+		Echvi_4411	0.30	-1.5
5,275,194	-		Echvi_4411	0.30	-1.5
5,275,194	-		Echvi_4411	0.30	-2.2
5,275,194	-		Echvi_4411	0.30	+1.3
5,275,194	-		Echvi_4411	0.30	+1.5
5,275,288	-		Echvi_4411	0.41	+0.2
5,275,321	-		Echvi_4411	0.45	+1.1
5,275,352	+		Echvi_4411	0.48	-0.7
5,275,352	+		Echvi_4411	0.48	+0.8
5,275,352	+		Echvi_4411	0.48	-1.3
5,275,352	+		Echvi_4411	0.48	+0.6
5,275,356	+		Echvi_4411	0.49	+1.6
5,275,356	+		Echvi_4411	0.49	+1.0
5,275,357	-		Echvi_4411	0.49	-1.3
5,275,357	-		Echvi_4411	0.49	-1.1
5,275,357	-		Echvi_4411	0.49	-0.8
5,275,357	-		Echvi_4411	0.49	+0.3
5,275,357	-		Echvi_4411	0.49	+0.9
5,275,445	-		Echvi_4411	0.59	+0.5
5,275,465	+		Echvi_4411	0.61	+1.4
5,275,634	+		Echvi_4411	0.80	-0.0
5,275,634	+		Echvi_4411	0.80	-0.5
5,275,635	-		Echvi_4411	0.81	+0.1
5,275,703	+		Echvi_4411	0.88	+1.3
5,275,704	-		Echvi_4411	0.88	+0.8
5,275,704	-		Echvi_4411	0.88	+0.2