Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3974

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
4,759,591	+		Echvi_3971	0.45	+1.6
4,759,591	+		Echvi_3971	0.45	-0.4
4,759,591	+		Echvi_3971	0.45	+0.7
4,759,591	+		Echvi_3971	0.45	+0.8
4,759,592	-		Echvi_3971	0.45	-1.2
4,759,592	-		Echvi_3971	0.45	-0.8
4,759,592	-		Echvi_3971	0.45	+0.7
4,759,620	+		Echvi_3971	0.49	+0.2
4,759,620	+		Echvi_3971	0.49	+0.6
4,759,621	-		Echvi_3971	0.49	+0.4
4,759,621	-		Echvi_3971	0.49	+0.1
4,759,637	+		Echvi_3971	0.51	-0.4
4,759,674	+		Echvi_3971	0.56	-0.1
4,759,866	-		Echvi_3971	0.81	-0.7
4,759,868	+		Echvi_3971	0.81	-0.3
4,759,868	+		Echvi_3971	0.81	-0.0
4,759,889	-		Echvi_3971	0.84	-0.7
4,759,911	+		Echvi_3971	0.86	+0.8
4,759,941	-				-0.2
4,759,953	-				+0.3
4,759,953	-				-1.2
4,759,985	+				+0.5
4,759,986	-				+0.2
4,759,986	-				-0.2
4,759,989	+				+1.0
4,760,007	-				-1.0
4,760,029	-				+0.7
4,760,035	+				+0.7
4,760,035	+				+0.9
4,760,036	-				-0.1
4,760,036	-				+0.2
4,760,036	-				+1.4
4,760,037	+				+1.4
4,760,037	+				+1.0
4,760,090	+		Echvi_3972	0.24	+1.0
4,760,181	+		Echvi_3972	0.60	+0.8
4,760,222	+		Echvi_3972	0.76	+1.5
4,760,255	+		Echvi_3972	0.88	+1.2
4,760,256	-		Echvi_3972	0.89	-2.0
4,760,285	-				+0.0
4,760,291	+				+1.0
4,760,291	+				+0.9
4,760,291	+				+0.4
4,760,292	-				+0.7
4,760,299	+				+0.9
4,760,300	-				-0.4
4,760,300	-				+0.0
4,760,300	-				-1.2
4,760,300	-				+0.0
4,760,300	-				+0.1
4,760,300	-				+1.0
4,760,300	-				+0.3
4,760,303	-				+0.0
4,760,437	+		Echvi_3973	0.41	+1.4
4,760,438	-		Echvi_3973	0.42	-0.5
4,760,463	-		Echvi_3973	0.60	-1.1
4,760,470	+		Echvi_3973	0.65	+1.6
4,760,470	+		Echvi_3973	0.65	+0.4
4,760,470	+		Echvi_3973	0.65	+0.8
4,760,470	+		Echvi_3973	0.65	+1.4
4,760,471	-		Echvi_3973	0.65	-0.4
4,760,471	-		Echvi_3973	0.65	+0.3
4,760,471	-		Echvi_3973	0.65	+0.8
4,760,471	-		Echvi_3973	0.65	+0.4
4,760,471	-		Echvi_3973	0.65	-0.4
4,760,523	+				+0.9
4,760,555	-				-0.1
4,760,555	-				-0.2
4,760,555	-				-1.4
4,760,557	+				+1.2
4,760,573	+				+0.4
4,760,586	-				-1.0
4,760,586	-				-2.2
4,760,589	+				-3.1
4,760,590	-				+1.4
4,760,608	+				-1.2
4,760,626	+				+0.1
4,760,626	+				-1.0
4,760,739	+				-0.8
4,760,739	+				-1.2
4,760,739	+				-1.0
4,760,793	+				-0.6
4,760,793	+				+0.7
4,760,793	+				-1.8
4,760,794	-				-0.2
4,761,003	-		Echvi_3974	0.18	-1.9
4,761,007	+		Echvi_3974	0.19	-0.6
4,761,027	-		Echvi_3974	0.19	-0.4
4,761,043	+		Echvi_3974	0.20	-3.3
4,761,059	+		Echvi_3974	0.21	+0.8
4,761,060	-		Echvi_3974	0.21	-2.1
4,761,192	+		Echvi_3974	0.27	-0.6
4,761,275	-		Echvi_3974	0.30	-1.0
4,761,279	+		Echvi_3974	0.30	+1.2
4,761,279	+		Echvi_3974	0.30	-1.2
4,761,279	+		Echvi_3974	0.30	-1.4
4,761,290	+		Echvi_3974	0.31	-2.4
4,761,323	+		Echvi_3974	0.32	+0.2
4,761,324	-		Echvi_3974	0.32	-0.4
4,761,324	-		Echvi_3974	0.32	+0.1
4,761,336	+		Echvi_3974	0.33	+0.1
4,761,337	-		Echvi_3974	0.33	-1.8
4,761,337	-		Echvi_3974	0.33	+0.6
4,761,337	-		Echvi_3974	0.33	-1.9
4,761,345	+		Echvi_3974	0.33	-0.2
4,761,345	+		Echvi_3974	0.33	+0.3
4,761,346	-		Echvi_3974	0.33	-0.4
4,761,346	-		Echvi_3974	0.33	+0.9
4,761,361	-		Echvi_3974	0.34	-1.0
4,761,406	+		Echvi_3974	0.36	+0.8
4,761,406	+		Echvi_3974	0.36	+0.1
4,761,406	+		Echvi_3974	0.36	-0.3
4,761,407	-		Echvi_3974	0.36	+0.4
4,761,407	-		Echvi_3974	0.36	+0.2
4,761,407	-		Echvi_3974	0.36	-0.9
4,761,407	-		Echvi_3974	0.36	-1.2
4,761,407	-		Echvi_3974	0.36	-0.0
4,761,409	-		Echvi_3974	0.36	-2.8
4,761,473	+		Echvi_3974	0.39	-1.4
4,761,474	-		Echvi_3974	0.39	-0.7
4,761,474	-		Echvi_3974	0.39	-0.3
4,761,490	-		Echvi_3974	0.39	+0.1
4,761,492	+		Echvi_3974	0.39	+1.0
4,761,492	+		Echvi_3974	0.39	-0.7
4,761,526	+		Echvi_3974	0.41	-1.1
4,761,528	+		Echvi_3974	0.41	-0.3
4,761,528	+		Echvi_3974	0.41	-0.2
4,761,528	+		Echvi_3974	0.41	-1.2
4,761,528	+		Echvi_3974	0.41	-0.9
4,761,599	-		Echvi_3974	0.44	-0.7
4,761,599	-		Echvi_3974	0.44	-0.2
4,761,599	-		Echvi_3974	0.44	+1.9
4,761,599	-		Echvi_3974	0.44	-0.3
4,761,599	-				+1.4
4,761,609	+		Echvi_3974	0.44	-0.2
4,761,623	+		Echvi_3974	0.45	+0.3
4,761,648	+		Echvi_3974	0.46	-0.8
4,761,648	+		Echvi_3974	0.46	-0.8
4,761,667	-		Echvi_3974	0.47	-2.1
4,761,667	-		Echvi_3974	0.47	-2.5
4,761,724	-		Echvi_3974	0.49	-0.7
4,761,767	+		Echvi_3974	0.51	-0.5
4,761,779	+		Echvi_3974	0.52	-0.8
4,761,779	+		Echvi_3974	0.52	-0.8
4,761,780	-		Echvi_3974	0.52	+0.3
4,761,780	-		Echvi_3974	0.52	-2.4
4,761,855	+		Echvi_3974	0.55	-1.6
4,761,855	+		Echvi_3974	0.55	-0.1
4,761,855	+		Echvi_3974	0.55	-1.4
4,761,856	-		Echvi_3974	0.55	+0.5
4,761,856	-		Echvi_3974	0.55	-2.1
4,761,869	-		Echvi_3974	0.56	-0.0
4,761,899	-		Echvi_3974	0.57	-0.5
4,761,930	+				+0.4
4,761,936	+		Echvi_3974	0.59	+1.6
4,761,940	-		Echvi_3974	0.59	-0.3
4,761,940	-		Echvi_3974	0.59	-1.1
4,761,940	-		Echvi_3974	0.59	-2.6
4,761,971	-		Echvi_3974	0.60	-0.4
4,761,977	+		Echvi_3974	0.60	-1.2
4,762,108	+		Echvi_3974	0.66	-1.6
4,762,108	+		Echvi_3974	0.66	+0.1
4,762,109	-		Echvi_3974	0.66	-0.0
4,762,110	+		Echvi_3974	0.66	-1.3
4,762,111	-		Echvi_3974	0.66	-0.3
4,762,111	-		Echvi_3974	0.66	-1.0
4,762,140	+		Echvi_3974	0.67	+0.5
4,762,141	-		Echvi_3974	0.67	+0.0
4,762,205	+		Echvi_3974	0.70	-0.8
4,762,205	+		Echvi_3974	0.70	-2.4
4,762,209	+		Echvi_3974	0.70	-0.5
4,762,210	-		Echvi_3974	0.70	-1.0
4,762,263	-		Echvi_3974	0.73	-1.8
4,762,284	-		Echvi_3974	0.73	-1.5
4,762,284	-		Echvi_3974	0.73	-0.4
4,762,334	-		Echvi_3974	0.76	+0.2
4,762,378	+		Echvi_3974	0.77	-0.8
4,762,378	+		Echvi_3974	0.77	-0.2
4,762,379	-		Echvi_3974	0.78	-0.2
4,762,383	+		Echvi_3974	0.78	-1.3
4,762,386	-		Echvi_3974	0.78	+0.2
4,762,386	-		Echvi_3974	0.78	-0.3
4,762,411	-		Echvi_3974	0.79	-1.1
4,762,412	+		Echvi_3974	0.79	+1.4
4,762,412	+		Echvi_3974	0.79	-1.5
4,762,413	-		Echvi_3974	0.79	-1.8
4,762,559	-		Echvi_3974	0.85	-0.7
4,762,559	-		Echvi_3974	0.85	-0.6
4,762,642	-		Echvi_3974	0.89	-1.2
4,762,642	-		Echvi_3974	0.89	-0.8
4,762,642	-		Echvi_3974	0.89	+0.7
4,762,650	-		Echvi_3974	0.89	+0.1
4,762,716	+				+0.4
4,762,736	-				-1.4
4,762,776	-				-0.4
4,762,876	+				-0.7
4,762,876	+				-1.0
4,762,877	-				-0.7
4,762,881	-				+0.6
4,762,927	+				-0.0
4,762,927	+				+0.9
4,762,940	+				-0.4
4,762,940	+				-0.9
4,762,941	-				-2.4
4,762,941	-				-0.3
4,762,941	-				+0.1
4,762,941	-				-1.0
4,762,948	+				-0.3
4,762,948	+				+2.0
4,762,957	+				+0.2
4,762,957	+				-1.0
4,762,957	+				+0.1
4,762,958	-				-0.3
4,762,958	-				+0.3
4,762,974	+				-0.6
4,762,974	+				-1.4
4,762,975	-				-1.7
4,762,975	-				+0.4
4,762,975	-				-0.8
4,762,975	-				+0.2
4,762,984	+				+0.3
4,762,985	-				-0.2
4,762,985	-				-0.9
4,762,985	-				-1.0
4,762,985	-				-0.6
4,762,988	+				-0.3
4,762,988	+				-0.4
4,762,988	+				+0.4
4,762,988	+				-0.3
4,762,989	-				-0.3
4,762,989	-				+1.0
4,762,989	-				-0.9
4,762,989	-				+0.0
4,762,989	-				+1.0
4,762,992	+				+1.4
4,762,993	-				-0.6
4,762,993	-				+0.4
4,763,003	+				+1.9
4,763,030	+				-0.0
4,763,045	+				+0.2
4,763,046	-				+0.5
4,763,046	-				+0.2
4,763,046	-				-1.9
4,763,106	+				+1.4
4,763,108	+				+1.0
4,763,142	+				-0.9
4,763,143	-				+0.8
4,763,143	-				-0.3
4,763,145	+				-1.3
4,763,145	+				+0.8
4,763,145	+				+1.0
4,763,148	-				-1.5
4,763,148	-				-0.3
4,763,148	-				+2.4
4,763,156	+				+0.4
4,763,168	-				-1.8
4,763,237	+				-0.2
4,763,247	+				+0.3
4,763,247	+				+0.3
4,763,255	+				-0.0
4,763,259	+				-0.4
4,763,317	-				-0.8