Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2108

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
2,488,944	+				-2.0
2,488,944	+				-1.7
2,488,944	+				-0.7
2,488,948	+				+0.9
2,488,948	+				-0.4
2,489,119	+		Echvi_2108	0.52	-0.1
2,489,138	+		Echvi_2108	0.57	-2.0
2,489,139	-		Echvi_2108	0.58	-1.7
2,489,141	-		Echvi_2108	0.58	-0.1
2,489,268	-				-0.0
2,489,291	-				-1.1
2,489,306	+				+0.2
2,489,366	+				+0.2
2,489,371	+				-0.1
2,489,371	+				-0.4
2,489,374	+				-0.6
2,489,383	+				+0.3
2,489,392	+		Echvi_2109	0.10	+0.3
2,489,392	+		Echvi_2109	0.10	-0.4
2,489,392	+		Echvi_2109	0.10	+0.6
2,489,393	-		Echvi_2109	0.10	-0.2
2,489,393	-		Echvi_2109	0.10	-1.8
2,489,393	-		Echvi_2109	0.10	+1.5
2,489,393	-		Echvi_2109	0.10	-0.3
2,489,397	-		Echvi_2109	0.11	+0.0
2,489,472	+		Echvi_2109	0.22	+0.3
2,489,472	+		Echvi_2109	0.22	+0.5
2,489,507	+		Echvi_2109	0.27	+0.1
2,489,508	-		Echvi_2109	0.27	-1.5
2,489,532	+		Echvi_2109	0.30	-0.6
2,489,532	+		Echvi_2109	0.30	+0.3
2,489,532	+		Echvi_2109	0.30	-0.5
2,489,639	+		Echvi_2109	0.45	-0.5
2,489,641	+		Echvi_2109	0.46	-1.7
2,489,641	+		Echvi_2109	0.46	+0.5
2,489,736	+		Echvi_2109	0.59	-1.1
2,489,736	+		Echvi_2109	0.59	-0.9
2,489,741	+		Echvi_2109	0.60	-0.7
2,489,741	+		Echvi_2109	0.60	-0.0
2,489,763	+		Echvi_2109	0.63	-0.5
2,489,768	+		Echvi_2109	0.64	-1.3
2,489,768	+		Echvi_2109	0.64	+0.3
2,489,769	-		Echvi_2109	0.64	-0.2
2,489,901	-		Echvi_2109	0.83	+0.9
2,489,950	-		Echvi_2109	0.90	-1.2
2,489,950	-		Echvi_2109	0.90	-0.2
2,489,951	+		Echvi_2109	0.90	-0.8
2,489,952	-		Echvi_2109	0.90	+0.8
2,489,958	-				-0.8
2,490,004	+				-0.9
2,490,007	+				-0.5