Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1683

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
1,973,292	+		Echvi_1682	0.76	+1.9
1,973,292	+		Echvi_1682	0.76	+0.5
1,973,292	+		Echvi_1682	0.76	-0.3
1,973,293	-		Echvi_1682	0.76	+0.3
1,973,312	+		Echvi_1682	0.77	-0.2
1,973,312	+		Echvi_1682	0.77	+0.5
1,973,312	+		Echvi_1682	0.77	-1.2
1,973,313	-		Echvi_1682	0.77	+0.6
1,973,428	+		Echvi_1682	0.81	+0.9
1,973,428	+		Echvi_1682	0.81	-0.2
1,973,494	-		Echvi_1682	0.83	+0.9
1,973,494	-		Echvi_1682	0.83	+1.3
1,973,494	-		Echvi_1682	0.83	-0.7
1,973,494	-		Echvi_1682	0.83	+0.7
1,973,497	+		Echvi_1682	0.83	-3.1
1,973,497	+		Echvi_1682	0.83	-0.6
1,973,497	+		Echvi_1682	0.83	+1.9
1,973,497	+		Echvi_1682	0.83	+0.9
1,973,498	-		Echvi_1682	0.83	+0.5
1,973,498	-		Echvi_1682	0.83	-1.8
1,973,499	+		Echvi_1682	0.83	+0.0
1,973,500	-		Echvi_1682	0.83	+0.4
1,973,500	-		Echvi_1682	0.83	-0.7
1,973,500	-		Echvi_1682	0.83	-0.5
1,973,503	+		Echvi_1682	0.83	-0.9
1,973,503	+		Echvi_1682	0.83	-0.6
1,973,503	+		Echvi_1682	0.83	-0.4
1,973,504	-		Echvi_1682	0.83	-0.1
1,973,504	-		Echvi_1682	0.83	-0.1
1,973,505	+		Echvi_1682	0.83	-0.9
1,973,558	+		Echvi_1682	0.85	+0.5
1,973,649	+		Echvi_1682	0.89	+0.8
1,973,650	-		Echvi_1682	0.89	-0.3
1,973,650	-		Echvi_1682	0.89	-0.0
1,973,650	-		Echvi_1682	0.89	+0.8
1,973,650	-		Echvi_1682	0.89	+1.1
1,973,650	-		Echvi_1682	0.89	+0.2
1,973,681	-		Echvi_1682	0.90	-0.5
1,973,742	+				-0.4
1,973,742	+				+0.6
1,973,743	-				+0.2
1,973,750	-				-0.2
1,973,786	+				+0.0
1,973,786	+				+0.0
1,973,786	+				-0.3
1,973,786	+				-0.1
1,973,787	-				+0.4
1,973,787	-				-0.6
1,973,787	-				+0.2
1,973,787	-				+0.2
1,973,787	-				+0.6
1,973,787	-				+0.6
1,973,787	-				-0.6
1,973,787	-				+2.0
1,973,787	-				+0.9
1,973,788	+				-1.3
1,973,788	+				+0.2
1,973,789	-				-0.7
1,973,789	-				+0.5
1,973,789	-				-0.6
1,973,790	+				+0.1
1,973,821	+				+0.9
1,973,927	+				-0.2
1,973,953	+				-0.5
1,974,086	-				-1.6
1,974,139	+				+1.6
1,974,139	+				+1.6
1,974,161	-				-0.2
1,974,179	+				+1.9
1,974,179	+				+0.2
1,974,291	-		Echvi_1683	0.22	+0.8
1,974,375	+		Echvi_1683	0.32	+0.4
1,974,376	-				+4.4
1,974,442	+		Echvi_1683	0.39	-0.0
1,974,443	-		Echvi_1683	0.39	+0.8
1,974,447	-		Echvi_1683	0.40	-0.7
1,974,447	-		Echvi_1683	0.40	+0.2
1,974,447	-		Echvi_1683	0.40	-0.4
1,974,481	+		Echvi_1683	0.44	-0.9
1,974,481	+		Echvi_1683	0.44	-0.7
1,974,482	-		Echvi_1683	0.44	+0.7
1,974,482	-		Echvi_1683	0.44	+0.6
1,974,501	+		Echvi_1683	0.46	-0.4
1,974,586	+		Echvi_1683	0.56	-0.3
1,974,587	-		Echvi_1683	0.56	+0.5
1,974,608	-		Echvi_1683	0.58	+0.0
1,974,733	+		Echvi_1683	0.73	+0.0
1,974,734	-		Echvi_1683	0.73	-0.9
1,974,734	-		Echvi_1683	0.73	+0.4
1,974,805	+		Echvi_1683	0.81	-0.9
1,974,805	+		Echvi_1683	0.81	+0.6
1,974,805	+		Echvi_1683	0.81	+1.0
1,974,805	+		Echvi_1683	0.81	-0.2
1,974,806	-		Echvi_1683	0.81	+0.4
1,974,806	-		Echvi_1683	0.81	-0.3
1,974,806	-		Echvi_1683	0.81	-0.7
1,974,806	-		Echvi_1683	0.81	-0.7
1,974,806	-		Echvi_1683	0.81	-0.6
1,974,914	+				+0.6
1,974,914	+				+0.3
1,974,919	+				+1.3
1,974,919	+				+0.4
1,974,920	-				-0.2
1,974,985	-				+1.0
1,974,985	-				+0.7
1,975,024	-				-0.3
1,975,088	-				+0.5
1,975,152	+				+0.5
1,975,153	-				+1.1
1,975,153	-				+1.6
1,975,158	+				-1.0
1,975,159	-				+0.0
1,975,169	+				+1.8
1,975,169	+				-0.5
1,975,170	-				+0.8
1,975,170	-				-0.2
1,975,170	-				-0.6
1,975,199	+				-0.4
1,975,200	-				+1.6
1,975,200	-				-0.2
1,975,247	+				+0.6
1,975,247	+				+1.1
1,975,248	-				+0.2
1,975,317	+				-0.3
1,975,318	-				+0.7
1,975,325	-				+1.4
1,975,331	-				+0.6
1,975,423	+				-0.4
1,975,423	+				-0.5
1,975,428	-				+0.6
1,975,428	-				+0.0
1,975,452	-				-0.1
1,975,473	+				-0.2
1,975,474	-				-1.5
1,975,474	-				-0.7
1,975,475	+				+0.6
1,975,483	+				-0.1
1,975,486	+				-2.2
1,975,548	+		Echvi_1684	0.18	-0.3
1,975,549	-		Echvi_1684	0.18	-0.6
1,975,550	+		Echvi_1684	0.19	-0.1
1,975,551	-		Echvi_1684	0.19	+0.0
1,975,551	-		Echvi_1684	0.19	-2.4
1,975,551	-		Echvi_1684	0.19	-0.1
1,975,551	-		Echvi_1684	0.19	+0.6
1,975,593	+		Echvi_1684	0.28	+1.6
1,975,594	-		Echvi_1684	0.29	-0.9
1,975,594	-		Echvi_1684	0.29	-0.6
1,975,594	-		Echvi_1684	0.29	+0.6
1,975,711	+		Echvi_1684	0.55	+0.1
1,975,712	-		Echvi_1684	0.55	-0.5
1,975,712	-		Echvi_1684	0.55	+0.6
1,975,717	+		Echvi_1684	0.56	+1.0
1,975,718	-		Echvi_1684	0.57	-0.4
1,975,718	-		Echvi_1684	0.57	+0.4
1,975,750	-		Echvi_1684	0.64	+0.4
1,975,769	+		Echvi_1684	0.68	-0.2
1,975,770	-		Echvi_1684	0.68	-0.1
1,975,782	-		Echvi_1684	0.71	+0.0
1,975,800	+		Echvi_1684	0.75	+0.6
1,975,800	+		Echvi_1684	0.75	-0.1
1,975,820	+		Echvi_1684	0.80	+0.2
1,975,881	+				-1.4
1,975,886	+				-0.6
1,975,912	+				-1.2
1,975,912	+				+1.1
1,975,912	+				+1.2
1,975,913	-				-1.1
1,975,956	+				-0.2
1,975,956	+				+0.3
1,975,957	-				-0.5