Experiment: m.b. Tetracycline 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0683 and Echvi_0684 are separated by 24 nucleotides Echvi_0684 and Echvi_0685 are separated by 352 nucleotides Echvi_0685 and Echvi_0686 are separated by 163 nucleotides
Echvi_0683: Echvi_0683 - Putative regulator of cell autolysis, at 770,427 to 772,589
_0683
Echvi_0684: Echvi_0684 - hypothetical protein, at 772,614 to 773,042
_0684
Echvi_0685: Echvi_0685 - Response regulator of the LytR/AlgR family, at 773,395 to 774,165
_0685
Echvi_0686: Echvi_0686 - Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein, at 774,329 to 775,747
_0686
Position (kb) 773
774
775 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 772.535 kb on + strand at 772.549 kb on + strand at 772.549 kb on + strand at 772.549 kb on + strand at 772.550 kb on - strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.587 kb on + strand at 772.587 kb on + strand at 772.609 kb on + strand at 772.609 kb on + strand at 772.610 kb on - strand at 772.641 kb on - strand at 772.664 kb on + strand, within Echvi_0684 at 772.664 kb on + strand, within Echvi_0684 at 772.708 kb on + strand, within Echvi_0684 at 772.740 kb on + strand, within Echvi_0684 at 772.740 kb on + strand, within Echvi_0684 at 772.741 kb on - strand, within Echvi_0684 at 772.758 kb on - strand, within Echvi_0684 at 772.784 kb on + strand, within Echvi_0684 at 772.784 kb on + strand at 772.785 kb on - strand, within Echvi_0684 at 772.789 kb on + strand, within Echvi_0684 at 772.804 kb on + strand, within Echvi_0684 at 772.804 kb on + strand, within Echvi_0684 at 772.805 kb on - strand, within Echvi_0684 at 772.922 kb on - strand, within Echvi_0684 at 772.982 kb on - strand, within Echvi_0684 at 773.017 kb on + strand at 773.018 kb on - strand at 773.018 kb on - strand at 773.042 kb on + strand at 773.043 kb on - strand at 773.049 kb on - strand at 773.055 kb on + strand at 773.056 kb on - strand at 773.086 kb on + strand at 773.091 kb on - strand at 773.091 kb on - strand at 773.169 kb on - strand at 773.190 kb on + strand at 773.190 kb on + strand at 773.190 kb on + strand at 773.212 kb on + strand at 773.260 kb on - strand at 773.278 kb on - strand at 773.281 kb on - strand at 773.281 kb on - strand at 773.283 kb on + strand at 773.319 kb on + strand at 773.325 kb on + strand at 773.325 kb on + strand at 773.329 kb on + strand at 773.338 kb on - strand at 773.349 kb on + strand at 773.349 kb on + strand at 773.351 kb on + strand at 773.354 kb on + strand at 773.354 kb on + strand at 773.360 kb on - strand at 773.385 kb on + strand at 773.385 kb on + strand at 773.386 kb on - strand at 773.387 kb on + strand at 773.402 kb on + strand at 773.444 kb on + strand at 773.445 kb on - strand at 773.453 kb on + strand at 773.474 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.527 kb on - strand, within Echvi_0685 at 773.558 kb on + strand, within Echvi_0685 at 773.559 kb on - strand, within Echvi_0685 at 773.611 kb on + strand, within Echvi_0685 at 773.625 kb on - strand, within Echvi_0685 at 773.668 kb on + strand, within Echvi_0685 at 773.668 kb on + strand, within Echvi_0685 at 773.812 kb on - strand, within Echvi_0685 at 773.814 kb on + strand, within Echvi_0685 at 773.814 kb on + strand, within Echvi_0685 at 773.862 kb on + strand, within Echvi_0685 at 773.884 kb on + strand, within Echvi_0685 at 773.884 kb on + strand, within Echvi_0685 at 773.906 kb on - strand, within Echvi_0685 at 773.921 kb on + strand, within Echvi_0685 at 773.921 kb on + strand, within Echvi_0685 at 773.943 kb on - strand, within Echvi_0685 at 774.032 kb on - strand, within Echvi_0685 at 774.092 kb on + strand at 774.093 kb on - strand at 774.096 kb on + strand at 774.097 kb on - strand at 774.097 kb on - strand at 774.098 kb on + strand at 774.099 kb on - strand at 774.099 kb on - strand at 774.126 kb on + strand at 774.164 kb on - strand at 774.171 kb on + strand at 774.214 kb on + strand at 774.215 kb on - strand at 774.215 kb on - strand at 774.215 kb on - strand at 774.215 kb on - strand at 774.215 kb on - strand at 774.216 kb on + strand at 774.232 kb on + strand at 774.233 kb on - strand at 774.241 kb on - strand at 774.241 kb on - strand at 774.241 kb on - strand at 774.251 kb on + strand at 774.252 kb on - strand at 774.260 kb on + strand at 774.260 kb on + strand at 774.261 kb on - strand at 774.263 kb on + strand at 774.264 kb on - strand at 774.271 kb on + strand at 774.271 kb on + strand at 774.271 kb on + strand at 774.272 kb on - strand at 774.324 kb on + strand at 774.328 kb on + strand at 774.328 kb on + strand at 774.329 kb on - strand at 774.329 kb on - strand at 774.334 kb on - strand at 774.334 kb on - strand at 774.491 kb on + strand, within Echvi_0686 at 774.491 kb on + strand, within Echvi_0686 at 774.491 kb on + strand, within Echvi_0686 at 774.492 kb on - strand, within Echvi_0686 at 774.492 kb on - strand, within Echvi_0686 at 774.494 kb on + strand, within Echvi_0686 at 774.494 kb on + strand, within Echvi_0686 at 774.494 kb on + strand, within Echvi_0686 at 774.495 kb on - strand, within Echvi_0686 at 774.495 kb on - strand, within Echvi_0686 at 774.495 kb on - strand, within Echvi_0686 at 774.496 kb on + strand, within Echvi_0686 at 774.496 kb on + strand, within Echvi_0686 at 774.496 kb on + strand, within Echvi_0686 at 774.500 kb on + strand, within Echvi_0686 at 774.500 kb on + strand, within Echvi_0686 at 774.501 kb on - strand, within Echvi_0686 at 774.501 kb on - strand, within Echvi_0686 at 774.501 kb on - strand, within Echvi_0686 at 774.522 kb on - strand, within Echvi_0686 at 774.564 kb on + strand, within Echvi_0686 at 774.564 kb on + strand, within Echvi_0686 at 774.564 kb on + strand, within Echvi_0686 at 774.564 kb on + strand, within Echvi_0686 at 774.635 kb on - strand, within Echvi_0686 at 774.705 kb on + strand, within Echvi_0686 at 774.705 kb on + strand, within Echvi_0686 at 774.706 kb on - strand, within Echvi_0686 at 774.780 kb on + strand, within Echvi_0686 at 774.803 kb on + strand at 774.803 kb on + strand, within Echvi_0686 at 774.803 kb on + strand, within Echvi_0686 at 774.804 kb on - strand, within Echvi_0686 at 774.804 kb on - strand, within Echvi_0686 at 774.804 kb on - strand, within Echvi_0686 at 774.804 kb on - strand, within Echvi_0686 at 774.805 kb on + strand, within Echvi_0686 at 774.806 kb on - strand, within Echvi_0686 at 774.848 kb on - strand, within Echvi_0686 at 774.848 kb on - strand, within Echvi_0686 at 774.886 kb on - strand, within Echvi_0686 at 774.911 kb on - strand, within Echvi_0686 at 774.959 kb on + strand, within Echvi_0686 at 774.959 kb on + strand, within Echvi_0686 at 774.959 kb on + strand, within Echvi_0686 at 774.960 kb on - strand, within Echvi_0686 at 774.960 kb on - strand, within Echvi_0686 at 774.960 kb on - strand, within Echvi_0686 at 774.960 kb on - strand, within Echvi_0686 at 774.960 kb on - strand, within Echvi_0686 at 774.963 kb on - strand, within Echvi_0686 at 774.963 kb on - strand, within Echvi_0686 at 775.112 kb on + strand, within Echvi_0686 at 775.136 kb on + strand, within Echvi_0686
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.06 mg/ml remove 772,535 + +0.7 772,549 + -1.9 772,549 + -0.1 772,549 + -0.3 772,550 - +0.4 772,553 + +0.9 772,553 + -1.2 772,553 + +0.6 772,553 + -0.2 772,553 + +0.4 772,553 + -1.4 772,554 - +1.3 772,554 - -1.1 772,554 - -1.5 772,554 - +1.4 772,554 - -0.1 772,587 + +0.3 772,587 + +0.6 772,609 + +0.4 772,609 + +3.0 772,610 - -0.3 772,641 - -0.5 772,664 + Echvi_0684 0.12 -0.1 772,664 + Echvi_0684 0.12 -1.4 772,708 + Echvi_0684 0.22 +0.2 772,740 + Echvi_0684 0.29 -0.2 772,740 + Echvi_0684 0.29 +1.2 772,741 - Echvi_0684 0.30 +1.7 772,758 - Echvi_0684 0.34 -0.5 772,784 + Echvi_0684 0.40 -0.1 772,784 + +0.1 772,785 - Echvi_0684 0.40 +0.2 772,789 + Echvi_0684 0.41 +1.7 772,804 + Echvi_0684 0.44 +0.2 772,804 + Echvi_0684 0.44 -0.3 772,805 - Echvi_0684 0.45 +0.2 772,922 - Echvi_0684 0.72 -0.8 772,982 - Echvi_0684 0.86 +2.0 773,017 + -1.1 773,018 - -0.1 773,018 - -0.7 773,042 + +0.9 773,043 - +1.0 773,049 - -0.8 773,055 + +0.2 773,056 - +0.3 773,086 + -0.5 773,091 - -0.2 773,091 - +0.1 773,169 - +0.4 773,190 + -0.9 773,190 + -0.1 773,190 + -0.1 773,212 + -0.5 773,260 - +0.0 773,278 - -0.9 773,281 - -0.7 773,281 - +0.8 773,283 + +0.1 773,319 + -0.7 773,325 + -0.0 773,325 + -0.5 773,329 + -0.5 773,338 - +0.3 773,349 + +0.3 773,349 + -0.9 773,351 + -0.4 773,354 + -0.3 773,354 + -0.2 773,360 - +1.4 773,385 + -0.4 773,385 + +0.1 773,386 - +0.2 773,387 + +0.8 773,402 + -0.1 773,444 + +0.9 773,445 - +0.8 773,453 + +0.2 773,474 + Echvi_0685 0.10 -1.7 773,526 + Echvi_0685 0.17 +0.0 773,526 + Echvi_0685 0.17 -0.4 773,526 + Echvi_0685 0.17 -0.2 773,527 - Echvi_0685 0.17 -1.3 773,558 + Echvi_0685 0.21 +0.5 773,559 - Echvi_0685 0.21 -0.9 773,611 + Echvi_0685 0.28 -0.5 773,625 - Echvi_0685 0.30 +0.0 773,668 + Echvi_0685 0.35 +0.0 773,668 + Echvi_0685 0.35 +0.1 773,812 - Echvi_0685 0.54 +0.1 773,814 + Echvi_0685 0.54 -0.7 773,814 + Echvi_0685 0.54 +0.7 773,862 + Echvi_0685 0.61 +0.5 773,884 + Echvi_0685 0.63 -1.6 773,884 + Echvi_0685 0.63 -0.0 773,906 - Echvi_0685 0.66 -1.8 773,921 + Echvi_0685 0.68 -0.2 773,921 + Echvi_0685 0.68 +0.3 773,943 - Echvi_0685 0.71 -0.2 774,032 - Echvi_0685 0.83 -1.0 774,092 + -0.7 774,093 - +0.3 774,096 + +0.1 774,097 - +0.5 774,097 - -0.8 774,098 + -1.0 774,099 - +1.7 774,099 - +0.6 774,126 + -0.0 774,164 - +0.1 774,171 + -0.4 774,214 + -0.9 774,215 - -1.9 774,215 - -0.4 774,215 - +1.7 774,215 - -1.3 774,215 - -0.6 774,216 + -0.1 774,232 + +0.7 774,233 - -1.1 774,241 - +0.7 774,241 - +0.6 774,241 - -0.1 774,251 + +0.5 774,252 - +0.3 774,260 + -2.3 774,260 + +0.3 774,261 - -0.3 774,263 + -0.4 774,264 - +0.1 774,271 + -0.5 774,271 + -0.8 774,271 + +0.1 774,272 - -0.2 774,324 + +0.6 774,328 + -0.3 774,328 + +0.5 774,329 - -1.9 774,329 - -0.9 774,334 - +0.3 774,334 - +2.7 774,491 + Echvi_0686 0.11 +2.4 774,491 + Echvi_0686 0.11 +0.4 774,491 + Echvi_0686 0.11 +0.1 774,492 - Echvi_0686 0.11 -0.5 774,492 - Echvi_0686 0.11 +0.2 774,494 + Echvi_0686 0.12 -1.6 774,494 + Echvi_0686 0.12 +0.4 774,494 + Echvi_0686 0.12 +0.3 774,495 - Echvi_0686 0.12 -0.1 774,495 - Echvi_0686 0.12 +1.4 774,495 - Echvi_0686 0.12 -0.5 774,496 + Echvi_0686 0.12 -0.3 774,496 + Echvi_0686 0.12 +0.2 774,496 + Echvi_0686 0.12 +0.1 774,500 + Echvi_0686 0.12 +0.8 774,500 + Echvi_0686 0.12 +1.2 774,501 - Echvi_0686 0.12 +2.4 774,501 - Echvi_0686 0.12 +0.2 774,501 - Echvi_0686 0.12 -0.3 774,522 - Echvi_0686 0.14 +0.3 774,564 + Echvi_0686 0.17 +0.5 774,564 + Echvi_0686 0.17 +0.2 774,564 + Echvi_0686 0.17 -0.9 774,564 + Echvi_0686 0.17 -0.9 774,635 - Echvi_0686 0.22 +0.0 774,705 + Echvi_0686 0.26 +1.7 774,705 + Echvi_0686 0.26 -0.3 774,706 - Echvi_0686 0.27 +1.7 774,780 + Echvi_0686 0.32 -1.7 774,803 + +1.1 774,803 + Echvi_0686 0.33 +0.0 774,803 + Echvi_0686 0.33 -0.1 774,804 - Echvi_0686 0.33 -0.5 774,804 - Echvi_0686 0.33 -0.4 774,804 - Echvi_0686 0.33 -0.1 774,804 - Echvi_0686 0.33 -1.8 774,805 + Echvi_0686 0.34 -0.7 774,806 - Echvi_0686 0.34 +0.7 774,848 - Echvi_0686 0.37 -0.0 774,848 - Echvi_0686 0.37 -2.8 774,886 - Echvi_0686 0.39 -0.7 774,911 - Echvi_0686 0.41 -0.1 774,959 + Echvi_0686 0.44 -0.2 774,959 + Echvi_0686 0.44 +0.6 774,959 + Echvi_0686 0.44 +0.1 774,960 - Echvi_0686 0.44 +1.7 774,960 - Echvi_0686 0.44 -0.5 774,960 - Echvi_0686 0.44 -0.1 774,960 - Echvi_0686 0.44 -0.2 774,960 - Echvi_0686 0.44 +1.4 774,963 - Echvi_0686 0.45 +0.4 774,963 - Echvi_0686 0.45 +0.3 775,112 + Echvi_0686 0.55 +0.0 775,136 + Echvi_0686 0.57 -0.3
Or see this region's nucleotide sequence