Experiment: m.b. Tetracycline 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0675 and Echvi_0676 are separated by 165 nucleotides Echvi_0676 and Echvi_0677 overlap by 4 nucleotides Echvi_0677 and Echvi_0678 are separated by 999 nucleotides
Echvi_0675: Echvi_0675 - Aspartate/tyrosine/aromatic aminotransferase, at 757,070 to 758,272
_0675
Echvi_0676: Echvi_0676 - Predicted glycosyltransferases, at 758,438 to 759,148
_0676
Echvi_0677: Echvi_0677 - Glycosyltransferases involved in cell wall biogenesis, at 759,145 to 759,939
_0677
Echvi_0678: Echvi_0678 - hypothetical protein, at 760,939 to 761,160
_0678
Position (kb) 759
760 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 758.266 kb on + strand at 758.266 kb on + strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.299 kb on + strand at 758.304 kb on - strand at 758.376 kb on + strand at 758.454 kb on + strand at 758.455 kb on - strand at 758.455 kb on - strand at 758.458 kb on + strand at 758.459 kb on - strand at 758.459 kb on - strand at 758.459 kb on - strand at 758.518 kb on + strand, within Echvi_0676 at 758.607 kb on - strand, within Echvi_0676 at 758.719 kb on - strand, within Echvi_0676 at 758.730 kb on + strand, within Echvi_0676 at 758.730 kb on + strand, within Echvi_0676 at 758.800 kb on - strand, within Echvi_0676 at 758.800 kb on - strand, within Echvi_0676 at 758.814 kb on + strand, within Echvi_0676 at 758.819 kb on + strand, within Echvi_0676 at 758.819 kb on + strand, within Echvi_0676 at 758.848 kb on + strand, within Echvi_0676 at 758.939 kb on + strand, within Echvi_0676 at 758.939 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.948 kb on - strand, within Echvi_0676 at 758.975 kb on + strand, within Echvi_0676 at 758.986 kb on + strand, within Echvi_0676 at 758.986 kb on + strand, within Echvi_0676 at 759.090 kb on - strand at 759.107 kb on + strand at 759.110 kb on + strand at 759.151 kb on + strand at 759.151 kb on + strand at 759.152 kb on - strand at 759.166 kb on + strand at 759.166 kb on + strand at 759.178 kb on - strand at 759.178 kb on - strand at 759.179 kb on + strand at 759.180 kb on - strand at 759.208 kb on + strand at 759.259 kb on - strand, within Echvi_0677 at 759.332 kb on + strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.434 kb on + strand, within Echvi_0677 at 759.435 kb on - strand, within Echvi_0677 at 759.438 kb on + strand, within Echvi_0677 at 759.438 kb on + strand, within Echvi_0677 at 759.439 kb on - strand, within Echvi_0677 at 759.439 kb on - strand, within Echvi_0677 at 759.490 kb on - strand, within Echvi_0677 at 759.526 kb on + strand, within Echvi_0677 at 759.527 kb on - strand, within Echvi_0677 at 759.527 kb on - strand, within Echvi_0677 at 759.570 kb on + strand, within Echvi_0677 at 759.570 kb on + strand, within Echvi_0677 at 759.571 kb on - strand, within Echvi_0677 at 759.575 kb on + strand, within Echvi_0677 at 759.575 kb on + strand, within Echvi_0677 at 759.608 kb on - strand, within Echvi_0677 at 759.608 kb on - strand, within Echvi_0677 at 759.614 kb on - strand, within Echvi_0677 at 759.629 kb on + strand, within Echvi_0677 at 759.630 kb on - strand, within Echvi_0677 at 759.630 kb on - strand, within Echvi_0677 at 759.658 kb on + strand, within Echvi_0677 at 759.672 kb on + strand, within Echvi_0677 at 759.673 kb on - strand, within Echvi_0677 at 759.673 kb on - strand, within Echvi_0677 at 759.745 kb on - strand, within Echvi_0677 at 759.745 kb on - strand, within Echvi_0677 at 759.798 kb on + strand, within Echvi_0677 at 759.798 kb on + strand, within Echvi_0677 at 759.799 kb on - strand, within Echvi_0677 at 759.799 kb on - strand, within Echvi_0677 at 759.821 kb on - strand, within Echvi_0677 at 759.827 kb on - strand, within Echvi_0677 at 759.837 kb on - strand, within Echvi_0677 at 759.837 kb on - strand, within Echvi_0677 at 759.876 kb on - strand at 759.876 kb on - strand at 759.890 kb on + strand at 759.890 kb on + strand at 759.891 kb on - strand at 759.910 kb on + strand at 759.978 kb on + strand at 760.005 kb on - strand at 760.009 kb on + strand at 760.018 kb on + strand at 760.019 kb on - strand at 760.025 kb on - strand at 760.025 kb on - strand at 760.028 kb on + strand at 760.028 kb on + strand at 760.028 kb on + strand at 760.029 kb on - strand at 760.031 kb on + strand at 760.032 kb on - strand at 760.071 kb on + strand at 760.129 kb on + strand at 760.137 kb on + strand at 760.138 kb on - strand at 760.155 kb on + strand at 760.160 kb on - strand at 760.230 kb on + strand at 760.242 kb on + strand at 760.286 kb on + strand at 760.287 kb on - strand at 760.287 kb on - strand at 760.290 kb on + strand at 760.290 kb on + strand at 760.347 kb on - strand at 760.353 kb on - strand at 760.359 kb on - strand at 760.361 kb on - strand at 760.367 kb on - strand at 760.519 kb on - strand at 760.527 kb on + strand at 760.528 kb on - strand at 760.528 kb on - strand at 760.563 kb on - strand at 760.580 kb on - strand at 760.588 kb on - strand at 760.652 kb on + strand at 760.653 kb on - strand at 760.696 kb on + strand at 760.697 kb on - strand at 760.719 kb on - strand at 760.782 kb on + strand at 760.782 kb on + strand at 760.783 kb on - strand at 760.784 kb on + strand at 760.784 kb on + strand at 760.784 kb on + strand at 760.784 kb on + strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.785 kb on - strand at 760.788 kb on + strand at 760.788 kb on + strand at 760.789 kb on - strand at 760.789 kb on - strand at 760.791 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.794 kb on + strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.795 kb on - strand at 760.796 kb on + strand at 760.796 kb on + strand at 760.796 kb on + strand at 760.796 kb on + strand at 760.797 kb on - strand at 760.859 kb on + strand at 760.871 kb on - strand at 760.874 kb on + strand at 760.874 kb on + strand at 760.874 kb on + strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.875 kb on - strand at 760.877 kb on - strand at 760.893 kb on - strand at 760.893 kb on - strand at 760.908 kb on - strand at 760.919 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.06 mg/ml remove 758,266 + +0.1 758,266 + -0.7 758,267 - -1.1 758,267 - +0.8 758,267 - +0.1 758,267 - +0.2 758,299 + -0.0 758,304 - +0.1 758,376 + +0.6 758,454 + -3.7 758,455 - -3.0 758,455 - -3.3 758,458 + -3.0 758,459 - -3.3 758,459 - -1.9 758,459 - -3.0 758,518 + Echvi_0676 0.11 -3.6 758,607 - Echvi_0676 0.24 -1.9 758,719 - Echvi_0676 0.40 -1.3 758,730 + Echvi_0676 0.41 -4.0 758,730 + Echvi_0676 0.41 -1.5 758,800 - Echvi_0676 0.51 -3.2 758,800 - Echvi_0676 0.51 -4.3 758,814 + Echvi_0676 0.53 -0.7 758,819 + Echvi_0676 0.54 -2.9 758,819 + Echvi_0676 0.54 -2.8 758,848 + Echvi_0676 0.58 -2.4 758,939 + Echvi_0676 0.70 -2.4 758,939 + Echvi_0676 0.70 -4.9 758,947 + Echvi_0676 0.72 -2.9 758,947 + Echvi_0676 0.72 -4.0 758,947 + Echvi_0676 0.72 -3.8 758,948 - Echvi_0676 0.72 -3.7 758,975 + Echvi_0676 0.76 -3.5 758,986 + Echvi_0676 0.77 -3.7 758,986 + Echvi_0676 0.77 -0.7 759,090 - -4.4 759,107 + -2.0 759,110 + -4.9 759,151 + -0.3 759,151 + -0.4 759,152 - +0.2 759,166 + +0.2 759,166 + -0.9 759,178 - +0.5 759,178 - +0.0 759,179 + +0.9 759,180 - -0.3 759,208 + +1.1 759,259 - Echvi_0677 0.14 +0.9 759,332 + Echvi_0677 0.24 -1.2 759,333 - Echvi_0677 0.24 +0.5 759,333 - Echvi_0677 0.24 -0.2 759,333 - Echvi_0677 0.24 +0.5 759,434 + Echvi_0677 0.36 +1.5 759,435 - Echvi_0677 0.36 -1.2 759,438 + Echvi_0677 0.37 -0.9 759,438 + Echvi_0677 0.37 +1.7 759,439 - Echvi_0677 0.37 +1.3 759,439 - Echvi_0677 0.37 -0.1 759,490 - Echvi_0677 0.43 -1.7 759,526 + Echvi_0677 0.48 -0.2 759,527 - Echvi_0677 0.48 +1.7 759,527 - Echvi_0677 0.48 -0.7 759,570 + Echvi_0677 0.53 +1.8 759,570 + Echvi_0677 0.53 +1.0 759,571 - Echvi_0677 0.54 -1.0 759,575 + Echvi_0677 0.54 +2.1 759,575 + Echvi_0677 0.54 +0.2 759,608 - Echvi_0677 0.58 +0.1 759,608 - Echvi_0677 0.58 +0.3 759,614 - Echvi_0677 0.59 -0.2 759,629 + Echvi_0677 0.61 +0.6 759,630 - Echvi_0677 0.61 +0.3 759,630 - Echvi_0677 0.61 +0.6 759,658 + Echvi_0677 0.65 +0.1 759,672 + Echvi_0677 0.66 +0.6 759,673 - Echvi_0677 0.66 +0.2 759,673 - Echvi_0677 0.66 -0.7 759,745 - Echvi_0677 0.75 +0.1 759,745 - Echvi_0677 0.75 +0.1 759,798 + Echvi_0677 0.82 +0.3 759,798 + Echvi_0677 0.82 +1.7 759,799 - Echvi_0677 0.82 +0.3 759,799 - Echvi_0677 0.82 -0.4 759,821 - Echvi_0677 0.85 +0.1 759,827 - Echvi_0677 0.86 -0.4 759,837 - Echvi_0677 0.87 +0.2 759,837 - Echvi_0677 0.87 +0.1 759,876 - +1.7 759,876 - -0.6 759,890 + +1.3 759,890 + +0.3 759,891 - -2.0 759,910 + -0.6 759,978 + +0.8 760,005 - +0.4 760,009 + +0.5 760,018 + -0.0 760,019 - -0.9 760,025 - -0.7 760,025 - -0.3 760,028 + +1.8 760,028 + -0.3 760,028 + -0.3 760,029 - -0.6 760,031 + -1.2 760,032 - -0.7 760,071 + -0.3 760,129 + +0.6 760,137 + +3.2 760,138 - +0.4 760,155 + -0.6 760,160 - -0.5 760,230 + -0.5 760,242 + +0.5 760,286 + +2.4 760,287 - -1.7 760,287 - +1.0 760,290 + +1.3 760,290 + +0.6 760,347 - -0.2 760,353 - -0.9 760,359 - +0.1 760,361 - -0.0 760,367 - +0.9 760,519 - +0.7 760,527 + -0.4 760,528 - +1.1 760,528 - -1.5 760,563 - -0.3 760,580 - -1.3 760,588 - +0.1 760,652 + +0.6 760,653 - -0.1 760,696 + +0.7 760,697 - -0.7 760,719 - -0.3 760,782 + -0.7 760,782 + -1.1 760,783 - -0.3 760,784 + -0.7 760,784 + -1.8 760,784 + +0.2 760,784 + -0.2 760,785 - +0.7 760,785 - +0.8 760,785 - -1.4 760,785 - -0.3 760,785 - +1.0 760,788 + -0.5 760,788 + -1.2 760,789 - -0.1 760,789 - -0.7 760,791 + -0.1 760,794 + -0.3 760,794 + -0.3 760,794 + -1.0 760,794 + -0.7 760,794 + -0.3 760,794 + +0.5 760,794 + +0.3 760,794 + -0.6 760,794 + -0.7 760,794 + +2.4 760,795 - +0.4 760,795 - -0.9 760,795 - +1.8 760,795 - +0.2 760,795 - +0.9 760,796 + +0.8 760,796 + +0.1 760,796 + -0.8 760,796 + +0.3 760,797 - +0.9 760,859 + -1.0 760,871 - -0.2 760,874 + +0.8 760,874 + -0.0 760,874 + +0.7 760,875 - +0.3 760,875 - -0.3 760,875 - -1.0 760,875 - +0.9 760,875 - -0.7 760,875 - +0.4 760,875 - -0.1 760,877 - -0.0 760,893 - -0.5 760,893 - +1.2 760,908 - +0.1 760,919 - +0.4
Or see this region's nucleotide sequence