Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0346

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
367,676	-		Echvi_0344	0.87	-0.5
367,683	+		Echvi_0344	0.88	+0.6
367,746	+				-0.5
367,839	+				+0.4
367,856	+				+0.1
367,856	+				-0.3
367,856	+				+2.3
367,856	+				+0.3
367,856	+				+0.3
367,856	+				+2.2
367,857	-				-0.3
367,857	-				+0.0
367,857	-				-0.0
367,857	-				-0.3
367,889	+				-0.6
367,889	+				-1.0
367,890	-				-0.1
367,890	-				-1.6
367,944	-				-0.8
367,944	-				+0.3
367,944	-				-0.7
367,954	-				-0.1
368,029	+				-0.4
368,044	+				+0.5
368,077	-				-0.2
368,133	+		Echvi_0345	0.17	+0.7
368,133	+		Echvi_0345	0.17	+0.2
368,134	-		Echvi_0345	0.17	+0.9
368,177	-		Echvi_0345	0.25	-0.6
368,270	+		Echvi_0345	0.42	+0.7
368,270	+		Echvi_0345	0.42	+0.6
368,271	-		Echvi_0345	0.42	+0.5
368,271	-		Echvi_0345	0.42	-1.2
368,287	+		Echvi_0345	0.45	-1.4
368,287	+		Echvi_0345	0.45	+1.8
368,287	+		Echvi_0345	0.45	+0.3
368,287	+		Echvi_0345	0.45	-1.3
368,288	-		Echvi_0345	0.45	-1.9
368,288	-		Echvi_0345	0.45	+0.0
368,288	-		Echvi_0345	0.45	-1.4
368,288	-		Echvi_0345	0.45	+0.6
368,291	+		Echvi_0345	0.46	+0.1
368,291	+		Echvi_0345	0.46	-0.0
368,291	+		Echvi_0345	0.46	-0.4
368,291	+		Echvi_0345	0.46	+1.3
368,291	+		Echvi_0345	0.46	+1.3
368,292	-		Echvi_0345	0.46	+0.6
368,384	+		Echvi_0345	0.63	+0.6
368,483	+		Echvi_0345	0.81	-0.1
368,484	-		Echvi_0345	0.81	-0.5
368,484	-		Echvi_0345	0.81	+0.0
368,533	+				-0.8
368,534	-				-0.2
368,567	+				-0.6
368,568	-				+2.2
368,568	-				+0.5
368,568	-				-0.4
368,571	+				-2.1
368,571	+				-0.7
368,572	-				-0.8
368,572	-				-0.9
368,575	-				-0.8
368,590	+				+0.3
368,594	+				+0.5
368,594	+				-0.3
368,653	+				-1.3
368,674	+				+1.6
368,749	+		Echvi_0346	0.19	+1.0
368,750	-		Echvi_0346	0.19	+0.4
368,782	+		Echvi_0346	0.26	+3.2
368,782	+		Echvi_0346	0.26	+0.3
368,782	+		Echvi_0346	0.26	+1.9
368,782	+		Echvi_0346	0.26	-0.2
368,782	+		Echvi_0346	0.26	-0.8
368,831	+		Echvi_0346	0.37	-0.5
368,995	+		Echvi_0346	0.74	+1.2
368,996	-		Echvi_0346	0.75	+0.6
369,074	+				-0.2
369,123	+				-1.2
369,124	-				+1.0
369,143	+				+0.4
369,144	-				+0.3
369,144	-				-0.7
369,144	-				+1.0
369,144	-				-0.7
369,220	+		Echvi_0347	0.15	+0.1
369,221	-		Echvi_0347	0.15	-0.6
369,419	+		Echvi_0347	0.35	+0.1
369,420	-		Echvi_0347	0.35	+0.8
369,486	+		Echvi_0347	0.42	-0.8
369,486	+		Echvi_0347	0.42	+0.4
369,653	+		Echvi_0347	0.58	-1.7
369,653	+		Echvi_0347	0.58	-1.8
369,654	-		Echvi_0347	0.59	+1.0
369,702	+		Echvi_0347	0.63	-1.4
369,733	-		Echvi_0347	0.66	-0.2
369,827	+		Echvi_0347	0.76	+0.3
369,827	+		Echvi_0347	0.76	-2.1
369,828	-		Echvi_0347	0.76	+0.3
370,048	-				-1.7
370,048	-				-1.7
370,051	+				-0.8
370,079	-				+0.4
370,079	-				+0.2
370,079	-				-2.8
370,083	-				+0.5