Strain Fitness in Escherichia coli BW25113 around b3996

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,193,952	+				-1.1
4,193,970	+				-0.0
4,193,980	-				+0.2
4,193,980	-				+1.4
4,194,014	-				-0.5
4,194,054	+				+0.7
4,194,061	-				+0.1
4,194,061	-				-0.9
4,194,118	+				+0.4
4,194,164	+				+0.9
4,194,165	+				-0.1
4,194,165	+				-0.6
4,194,173	-				-0.3
4,194,515	-	rsd	b3995	0.34	+0.1
4,194,516	+	rsd	b3995	0.34	-0.2
4,194,602	-	rsd	b3995	0.52	+0.3
4,194,602	-	rsd	b3995	0.52	-0.9
4,194,726	+	rsd	b3995	0.78	-1.2
4,194,726	+	rsd	b3995	0.78	-1.3
4,194,728	-	rsd	b3995	0.78	+0.3
4,194,728	-	rsd	b3995	0.78	+1.0
4,194,732	+	rsd	b3995	0.79	-0.0
4,194,732	+	rsd	b3995	0.79	+0.2
4,194,738	-	rsd	b3995	0.80	-0.5
4,194,751	+	rsd	b3995	0.83	+1.1
4,194,755	+	rsd	b3995	0.84	-0.4
4,194,812	-				+0.3
4,194,822	+				-0.3
4,194,905	+				-1.4
4,194,911	-				+0.2
4,194,923	+				-0.7
4,194,923	+				-1.0
4,194,965	+				+1.6
4,195,102	-	nudC	b3996	0.23	-0.1
4,195,102	-	nudC	b3996	0.23	+1.6
4,195,124	-	nudC	b3996	0.26	+0.3
4,195,125	+	nudC	b3996	0.26	+1.0
4,195,143	-	nudC	b3996	0.28	+1.0
4,195,178	+	nudC	b3996	0.33	+0.8
4,195,178	+	nudC	b3996	0.33	+1.6
4,195,216	-	nudC	b3996	0.37	+1.3
4,195,216	-	nudC	b3996	0.37	+1.9
4,195,218	+	nudC	b3996	0.38	+1.3
4,195,218	+	nudC	b3996	0.38	+1.1
4,195,260	+	nudC	b3996	0.43	+1.1
4,195,260	+	nudC	b3996	0.43	+2.0
4,195,270	+	nudC	b3996	0.44	+1.7
4,195,278	-	nudC	b3996	0.45	+0.9
4,195,296	-	nudC	b3996	0.48	+0.9
4,195,305	-	nudC	b3996	0.49	+0.6
4,195,312	+	nudC	b3996	0.50	+0.6
4,195,312	+	nudC	b3996	0.50	+0.6
4,195,315	-	nudC	b3996	0.50	+2.0
4,195,355	+	nudC	b3996	0.55	+0.7
4,195,380	-	nudC	b3996	0.59	+1.7
4,195,386	+	nudC	b3996	0.59	+1.1
4,195,389	-	nudC	b3996	0.60	+0.8
4,195,391	-	nudC	b3996	0.60	+0.9
4,195,391	-	nudC	b3996	0.60	+0.8
4,195,394	-	nudC	b3996	0.60	+1.7
4,195,448	-	nudC	b3996	0.67	+1.3
4,195,448	-	nudC	b3996	0.67	+0.9
4,195,449	+	nudC	b3996	0.68	+1.1
4,195,457	-	nudC	b3996	0.69	+1.0
4,195,457	-	nudC	b3996	0.69	+2.0
4,195,472	-	nudC	b3996	0.71	+1.6
4,195,494	+	nudC	b3996	0.73	+0.2
4,195,494	-	nudC	b3996	0.73	+1.1
4,195,607	-	nudC	b3996	0.88	+1.3
4,195,619	+	nudC	b3996	0.90	+1.2
4,195,619	+	nudC	b3996	0.90	+1.6
4,195,641	-				+0.8
4,195,641	-				+1.0
4,195,651	-				+0.4
4,195,661	-				+1.3
4,195,661	-				+1.3
4,195,665	+				+1.5
4,195,670	+				+0.8
4,195,680	+				-0.6
4,195,686	-				+0.8
4,195,688	+				+0.7
4,195,688	+				+0.7
4,195,688	+				+1.7
4,195,690	+				-0.4
4,195,699	+				-1.2
4,195,699	+				-1.3
4,195,699	+				-0.6
4,195,707	-				-0.5
4,195,707	-				+0.8
4,195,707	-				+0.5
4,195,707	-				+1.3
4,195,707	-				-0.5
4,195,707	-				+2.3
4,195,707	-				+0.7
4,195,709	-				+1.9
4,195,723	-				+0.8