Strain Fitness in Escherichia coli BW25113 around b3158

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,298,578	+	yhbS	b3156	0.60	-0.0
3,298,578	+	yhbS	b3156	0.60	-0.7
3,298,591	-	yhbS	b3156	0.62	-0.4
3,298,635	-	yhbS	b3156	0.71	+0.7
3,298,635	-	yhbS	b3156	0.71	-0.5
3,298,649	-	yhbS	b3156	0.74	-0.4
3,298,724	+	yhbS	b3156	0.89	-0.1
3,298,737	+				-1.0
3,298,737	+				-0.3
3,298,858	+	yhbT	b3157	0.16	-0.5
3,298,864	+	yhbT	b3157	0.17	-2.2
3,298,951	-	yhbT	b3157	0.34	+3.3
3,299,033	-	yhbT	b3157	0.49	+2.6
3,299,033	-	yhbT	b3157	0.49	+2.1
3,299,115	+	yhbT	b3157	0.65	-0.3
3,299,123	-	yhbT	b3157	0.66	+2.8
3,299,123	-	yhbT	b3157	0.66	+1.8
3,299,220	-	yhbT	b3157	0.85	+2.2
3,299,399	-				+3.3
3,299,399	-				+2.9
3,299,515	+				-0.4
3,299,515	+				-0.2
3,299,550	-				+3.1
3,299,626	+	yhbU	b3158	0.12	-0.4
3,299,785	-	yhbU	b3158	0.28	+1.3
3,299,785	-	yhbU	b3158	0.28	+2.7
3,299,809	-	yhbU	b3158	0.30	+1.2
3,299,857	+	yhbU	b3158	0.35	+0.7
3,299,860	-	yhbU	b3158	0.35	+1.8
3,299,968	+	yhbU	b3158	0.46	-0.0
3,299,968	+	yhbU	b3158	0.46	+0.2
3,299,968	+	yhbU	b3158	0.46	-1.2
3,299,981	-	yhbU	b3158	0.48	+1.7
3,300,162	+	yhbU	b3158	0.66	+0.1
3,300,216	-	yhbU	b3158	0.71	+2.2
3,300,216	-	yhbU	b3158	0.71	+2.0
3,300,225	-	yhbU	b3158	0.72	+0.9
3,300,240	-	yhbU	b3158	0.74	+1.7
3,300,349	-	yhbU	b3158	0.85	+0.5
3,300,349	-	yhbU	b3158	0.85	-0.2
3,300,388	+	yhbU	b3158	0.88	-0.0
3,300,396	-	yhbU	b3158	0.89	-0.0
3,300,396	-	yhbU	b3158	0.89	+0.3
3,300,396	-	yhbU	b3158	0.89	-0.1
3,300,396	-	yhbU	b3158	0.89	-0.5
3,300,396	-	yhbU	b3158	0.89	+0.1
3,300,451	+				-0.8
3,300,451	+				+2.0
3,300,451	+				+0.2
3,300,451	+				+1.4
3,300,476	+				-0.0
3,300,532	+				+1.8
3,300,540	-				-0.3
3,300,541	-				-0.0
3,300,543	-				-0.2
3,300,543	-				+0.1
3,300,545	+				-0.6
3,300,630	-	yhbV	b3159	0.14	+2.0
3,300,632	-	yhbV	b3159	0.14	-0.2
3,300,729	+	yhbV	b3159	0.25	+0.2
3,300,742	-	yhbV	b3159	0.26	-1.5
3,300,742	-	yhbV	b3159	0.26	+0.4
3,300,742	-	yhbV	b3159	0.26	-0.9
3,300,761	+	yhbV	b3159	0.28	+0.8
3,300,861	+	yhbV	b3159	0.40	+0.1
3,300,917	-	yhbV	b3159	0.46	-0.5
3,300,922	-	yhbV	b3159	0.47	-0.3
3,300,957	+	yhbV	b3159	0.51	-0.4
3,300,993	+	yhbV	b3159	0.55	+1.4
3,300,993	+	yhbV	b3159	0.55	+1.0
3,301,040	-	yhbV	b3159	0.60	+1.0
3,301,094	-	yhbV	b3159	0.66	+1.0
3,301,094	-	yhbV	b3159	0.66	+0.3
3,301,100	+	yhbV	b3159	0.67	+0.7
3,301,100	+	yhbV	b3159	0.67	-0.4
3,301,230	+	yhbV	b3159	0.82	+0.2
3,301,230	+	yhbV	b3159	0.82	-1.8
3,301,245	+	yhbV	b3159	0.84	+0.6
3,301,245	+	yhbV	b3159	0.84	-0.9
3,301,286	-	yhbV	b3159	0.88	-0.2
3,301,286	-	yhbV	b3159	0.88	-0.4
3,301,305	-				-0.0
3,301,305	-				-1.3
3,301,467	+				+0.3