Strain Fitness in Escherichia coli BW25113 around b3157

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,297,842	+	yhbP	b3154	0.78	-1.0
3,297,852	+	yhbP	b3154	0.81	-0.4
3,297,857	+	yhbP	b3154	0.82	-2.3
3,297,879	+	yhbP	b3154	0.87	-0.3
3,297,889	-	yhbP	b3154	0.89	+0.4
3,297,889	-	yhbP	b3154	0.89	-1.0
3,297,960	+				+0.1
3,297,967	+				+0.8
3,297,967	+				+0.6
3,297,974	-				+0.3
3,298,077	+	yhbQ	b3155	0.29	-0.8
3,298,077	+	yhbQ	b3155	0.29	+0.5
3,298,121	+	yhbQ	b3155	0.44	-0.3
3,298,129	+	yhbQ	b3155	0.47	-0.3
3,298,129	+	yhbQ	b3155	0.47	+0.7
3,298,238	+	yhbQ	b3155	0.83	+1.4
3,298,238	+	yhbQ	b3155	0.83	+1.4
3,298,249	+	yhbQ	b3155	0.86	-0.5
3,298,298	+				-0.0
3,298,298	+				-1.0
3,298,304	-				-1.3
3,298,339	+	yhbS	b3156	0.12	-0.2
3,298,411	+	yhbS	b3156	0.27	-0.7
3,298,411	+	yhbS	b3156	0.27	+0.7
3,298,427	+	yhbS	b3156	0.30	-1.3
3,298,435	-	yhbS	b3156	0.31	-0.9
3,298,459	-	yhbS	b3156	0.36	-0.4
3,298,483	-	yhbS	b3156	0.41	-0.3
3,298,485	-	yhbS	b3156	0.41	-0.6
3,298,495	-	yhbS	b3156	0.43	-1.2
3,298,497	+	yhbS	b3156	0.44	-0.6
3,298,504	-	yhbS	b3156	0.45	-1.0
3,298,578	+	yhbS	b3156	0.60	-0.0
3,298,578	+	yhbS	b3156	0.60	-0.7
3,298,591	-	yhbS	b3156	0.62	-0.4
3,298,635	-	yhbS	b3156	0.71	+0.7
3,298,635	-	yhbS	b3156	0.71	-0.5
3,298,649	-	yhbS	b3156	0.74	-0.4
3,298,724	+	yhbS	b3156	0.89	-0.1
3,298,737	+				-1.0
3,298,737	+				-0.3
3,298,858	+	yhbT	b3157	0.16	-0.5
3,298,864	+	yhbT	b3157	0.17	-2.2
3,298,951	-	yhbT	b3157	0.34	+3.3
3,299,033	-	yhbT	b3157	0.49	+2.6
3,299,033	-	yhbT	b3157	0.49	+2.1
3,299,115	+	yhbT	b3157	0.65	-0.3
3,299,123	-	yhbT	b3157	0.66	+2.8
3,299,123	-	yhbT	b3157	0.66	+1.8
3,299,220	-	yhbT	b3157	0.85	+2.2
3,299,399	-				+3.3
3,299,399	-				+2.9
3,299,515	+				-0.4
3,299,515	+				-0.2
3,299,550	-				+3.1
3,299,626	+	yhbU	b3158	0.12	-0.4
3,299,785	-	yhbU	b3158	0.28	+1.3
3,299,785	-	yhbU	b3158	0.28	+2.7
3,299,809	-	yhbU	b3158	0.30	+1.2
3,299,857	+	yhbU	b3158	0.35	+0.7
3,299,860	-	yhbU	b3158	0.35	+1.8
3,299,968	+	yhbU	b3158	0.46	-0.0
3,299,968	+	yhbU	b3158	0.46	+0.2
3,299,968	+	yhbU	b3158	0.46	-1.2
3,299,981	-	yhbU	b3158	0.48	+1.7
3,300,162	+	yhbU	b3158	0.66	+0.1
3,300,216	-	yhbU	b3158	0.71	+2.2
3,300,216	-	yhbU	b3158	0.71	+2.0
3,300,225	-	yhbU	b3158	0.72	+0.9
3,300,240	-	yhbU	b3158	0.74	+1.7