Strain Fitness in Escherichia coli BW25113 around b2009
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,077,858 | - | yeeA | b2008 | 0.28 | +0.1 |
| 2,077,895 | + | yeeA | b2008 | 0.32 | -0.6 |
| 2,077,895 | + | yeeA | b2008 | 0.32 | +1.2 |
| 2,078,047 | - | yeeA | b2008 | 0.46 | +0.4 |
| 2,078,068 | + | yeeA | b2008 | 0.48 | +1.1 |
| 2,078,115 | - | yeeA | b2008 | 0.53 | +0.2 |
| 2,078,611 | - | -0.3 | |||
| 2,078,684 | - | -0.7 | |||
| 2,078,689 | - | +0.2 | |||
| 2,078,853 | + | +2.4 | |||
| 2,078,861 | - | sbmC | b2009 | 0.10 | -0.6 |
| 2,078,864 | + | sbmC | b2009 | 0.11 | -0.2 |
| 2,079,000 | + | sbmC | b2009 | 0.39 | +1.4 |
| 2,079,077 | + | sbmC | b2009 | 0.56 | -0.8 |
| 2,079,281 | + | +0.8 | |||
| 2,079,472 | - | +0.3 | |||
| 2,079,472 | - | +0.8 | |||
| 2,079,505 | - | +0.2 | |||
| 2,079,568 | - | dacD | b2010 | 0.14 | -0.2 |
| 2,079,612 | + | dacD | b2010 | 0.18 | -0.8 |
| 2,079,630 | + | dacD | b2010 | 0.19 | +0.5 |
| 2,079,784 | + | dacD | b2010 | 0.32 | +1.2 |
| 2,079,833 | - | dacD | b2010 | 0.37 | +0.4 |
| 2,079,833 | - | dacD | b2010 | 0.37 | -1.0 |
| 2,079,857 | + | dacD | b2010 | 0.39 | -0.2 |
| 2,079,857 | + | dacD | b2010 | 0.39 | -0.2 |
| 2,079,966 | + | dacD | b2010 | 0.48 | +0.1 |
| 2,080,001 | + | dacD | b2010 | 0.51 | -2.2 |
| 2,080,041 | + | dacD | b2010 | 0.54 | +0.1 |
Or see this region's nucleotide sequence