Strain Fitness in Escherichia coli BW25113 around b1877

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,959,835	+				-0.6
1,959,850	+				+0.2
1,959,850	+				+0.3
1,959,881	+				+0.0
1,959,887	-				+0.1
1,959,907	+				-0.3
1,959,932	-				-1.2
1,959,960	+				+0.7
1,959,979	+				+0.8
1,960,031	+				+0.1
1,960,035	+				-1.6
1,960,035	+				-0.8
1,960,040	+				-0.8
1,960,040	+				-0.8
1,960,065	+	yecT	b1877	0.14	-2.2
1,960,067	-	yecT	b1877	0.15	+0.4
1,960,079	-	yecT	b1877	0.17	+0.4
1,960,079	-	yecT	b1877	0.17	-1.0
1,960,120	+	yecT	b1877	0.25	-1.0
1,960,129	+	yecT	b1877	0.27	+0.5
1,960,144	+	yecT	b1877	0.30	+1.6
1,960,274	-	yecT	b1877	0.57	+0.0
1,960,274	-	yecT	b1877	0.57	+1.1
1,960,357	+	yecT	b1877	0.74	+0.4
1,960,358	+	yecT	b1877	0.74	-1.2
1,960,372	-	yecT	b1877	0.77	-0.0
1,960,390	+	yecT	b1877	0.81	-0.4
1,960,390	+	yecT	b1877	0.81	-0.8
1,960,391	+	yecT	b1877	0.81	-0.7
1,960,431	+	yecT	b1877	0.89	+2.6
1,960,431	+	yecT	b1877	0.89	+0.5
1,960,439	+				-1.3
1,960,511	-				+0.1
1,960,511	-				-0.1
1,960,560	-				-0.9
1,960,646	-	flhE	b1878	0.11	-0.1
1,960,680	-	flhE	b1878	0.19	-0.6
1,960,723	-	flhE	b1878	0.30	+0.8
1,960,723	-	flhE	b1878	0.30	+0.3
1,960,813	+	flhE	b1878	0.53	-0.2
1,960,844	-	flhE	b1878	0.61	-0.4
1,960,846	-	flhE	b1878	0.62	+0.7
1,960,846	-	flhE	b1878	0.62	-0.2
1,960,882	+	flhE	b1878	0.71	+0.6
1,960,882	+	flhE	b1878	0.71	+0.4
1,960,988	-				-2.1
1,961,060	-				-0.2
1,961,060	-				-1.0
1,961,071	-				+0.4
1,961,144	+				-0.9
1,961,162	-				-0.6
1,961,264	+	flhA	b1879	0.13	-0.2
1,961,329	-	flhA	b1879	0.16	+0.6
1,961,415	-	flhA	b1879	0.20	+0.3
1,961,422	+	flhA	b1879	0.20	-0.2
1,961,456	+	flhA	b1879	0.22	+0.0