Strain Fitness in Escherichia coli BW25113 around b1394
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,455,315 | + | paaE | b1392 | 0.80 | +0.9 |
1,455,392 | - | paaE | b1392 | 0.88 | +0.4 |
1,455,429 | - | +0.7 | |||
1,455,610 | + | paaF | b1393 | 0.12 | +0.7 |
1,456,073 | + | paaF | b1393 | 0.72 | -0.6 |
1,456,216 | - | -0.3 | |||
1,456,216 | - | -0.9 | |||
1,456,490 | + | paaG | b1394 | 0.26 | -2.1 |
1,456,637 | + | paaG | b1394 | 0.44 | +0.4 |
1,456,780 | - | paaG | b1394 | 0.62 | -1.0 |
1,456,910 | + | paaG | b1394 | 0.79 | -1.3 |
1,457,029 | + | +0.5 | |||
1,457,029 | + | -0.3 | |||
1,457,192 | + | +1.3 | |||
1,457,264 | + | paaH | b1395 | 0.13 | +0.7 |
1,457,625 | + | paaH | b1395 | 0.38 | +0.2 |
1,457,625 | + | paaH | b1395 | 0.38 | +0.1 |
1,457,668 | + | paaH | b1395 | 0.41 | +1.0 |
1,457,750 | + | paaH | b1395 | 0.47 | +0.7 |
1,457,822 | + | paaH | b1395 | 0.52 | -0.7 |
1,457,921 | - | paaH | b1395 | 0.59 | +0.0 |
1,457,921 | - | paaH | b1395 | 0.59 | +0.5 |
1,457,941 | + | paaH | b1395 | 0.60 | -0.2 |
1,457,979 | + | paaH | b1395 | 0.63 | +1.3 |
1,458,061 | - | paaH | b1395 | 0.69 | +0.4 |
1,458,061 | - | paaH | b1395 | 0.69 | -0.0 |
Or see this region's nucleotide sequence