Strain Fitness in Ralstonia solanacearum UW163 around UW163_RS22030

Experiment: CPG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	CPG
1,521,312	-		UW163_RS22025	0.22	+0.1
1,521,389	+		UW163_RS22025	0.32	-0.5
1,521,390	-		UW163_RS22025	0.32	-1.3
1,521,505	+		UW163_RS22025	0.46	+0.0
1,521,517	+		UW163_RS22025	0.48	-0.0
1,521,517	+		UW163_RS22025	0.48	-0.9
1,521,517	+		UW163_RS22025	0.48	-1.4
1,521,517	+		UW163_RS22025	0.48	-0.3
1,521,517	+		UW163_RS22025	0.48	-0.7
1,521,517	+		UW163_RS22025	0.48	-0.6
1,521,517	+		UW163_RS22025	0.48	+0.6
1,521,517	+		UW163_RS22025	0.48	+0.7
1,521,517	+		UW163_RS22025	0.48	-1.2
1,521,518	-		UW163_RS22025	0.48	+0.2
1,521,518	-		UW163_RS22025	0.48	-0.4
1,521,518	-		UW163_RS22025	0.48	+0.3
1,521,518	-		UW163_RS22025	0.48	-0.3
1,521,518	-		UW163_RS22025	0.48	+0.6
1,521,518	-		UW163_RS22025	0.48	-1.5
1,521,518	-		UW163_RS22025	0.48	-0.5
1,521,518	-		UW163_RS22025	0.48	-0.4
1,521,518	-		UW163_RS22025	0.48	+1.1
1,521,518	-		UW163_RS22025	0.48	-2.5
1,521,518	-		UW163_RS22025	0.48	-0.4
1,521,519	-		UW163_RS22025	0.48	-0.7
1,521,846	+		UW163_RS22025	0.88	-0.4
1,521,954	+				+0.0
1,521,954	+				+0.7
1,521,954	+				-0.7
1,521,954	+				-0.7
1,521,955	-				-0.5
1,521,955	-				-0.7
1,521,955	-				+0.6
1,521,955	-				-0.3
1,521,955	-				+0.3
1,521,955	-				-0.3
1,521,955	-				-0.7
1,521,964	+				-0.8
1,521,964	+				+0.3
1,521,964	+				+1.3
1,521,965	-				+0.2
1,521,999	+				-0.3
1,521,999	+				+1.1
1,521,999	+				+0.8
1,521,999	+				-1.5
1,521,999	+				-0.8
1,522,000	-				+0.1
1,522,000	-				+0.8
1,522,000	-				+0.2
1,522,000	-				-0.5
1,522,000	-				-0.3
1,522,000	-				-0.1
1,522,024	+				-0.4
1,522,174	-		UW163_RS22030	0.12	-0.1
1,522,497	+		UW163_RS22030	0.34	-0.3
1,522,500	+		UW163_RS22030	0.34	+1.1
1,522,500	+		UW163_RS22030	0.34	-0.7
1,522,501	-		UW163_RS22030	0.34	-0.7
1,522,501	-		UW163_RS22030	0.34	-0.3
1,522,501	-		UW163_RS22030	0.34	+0.2
1,522,522	+		UW163_RS22030	0.36	+1.3
1,522,678	+		UW163_RS22030	0.47	-0.1
1,522,679	+		UW163_RS22030	0.47	-0.4
1,522,679	+		UW163_RS22030	0.47	+0.7
1,522,679	+		UW163_RS22030	0.47	-0.6
1,522,680	-		UW163_RS22030	0.47	-0.5
1,522,680	-		UW163_RS22030	0.47	+1.9
1,522,680	-		UW163_RS22030	0.47	+1.3
1,522,680	-		UW163_RS22030	0.47	+0.3
1,522,745	+		UW163_RS22030	0.51	-0.1
1,522,746	-		UW163_RS22030	0.51	-1.0
1,522,746	-		UW163_RS22030	0.51	+0.0
1,522,807	-		UW163_RS22030	0.55	-1.7
1,522,847	+		UW163_RS22030	0.58	+1.5
1,522,847	+		UW163_RS22030	0.58	-0.4
1,522,847	+		UW163_RS22030	0.58	-0.5
1,522,847	+		UW163_RS22030	0.58	-1.7
1,522,847	+		UW163_RS22030	0.58	-0.7
1,522,848	-		UW163_RS22030	0.58	-0.3
1,522,848	-		UW163_RS22030	0.58	+0.4
1,522,848	-		UW163_RS22030	0.58	+0.1
1,522,899	+		UW163_RS22030	0.62	-1.1
1,522,899	+		UW163_RS22030	0.62	-0.3
1,522,899	+		UW163_RS22030	0.62	-0.5
1,522,899	+		UW163_RS22030	0.62	-0.5
1,522,899	+		UW163_RS22030	0.62	+0.2
1,522,899	+		UW163_RS22030	0.62	+0.2
1,522,899	+		UW163_RS22030	0.62	-0.2
1,522,899	+		UW163_RS22030	0.62	+1.0
1,522,899	+		UW163_RS22030	0.62	-0.2
1,522,899	+		UW163_RS22030	0.62	+0.3
1,522,899	+		UW163_RS22030	0.62	-0.1
1,522,900	-		UW163_RS22030	0.62	-0.3
1,522,900	-		UW163_RS22030	0.62	-0.1
1,522,900	-		UW163_RS22030	0.62	+1.3
1,522,900	-		UW163_RS22030	0.62	+0.7
1,522,900	-		UW163_RS22030	0.62	+1.0
1,522,900	-		UW163_RS22030	0.62	+0.3
1,522,900	-		UW163_RS22030	0.62	-0.4
1,522,900	-		UW163_RS22030	0.62	-0.3
1,522,900	-		UW163_RS22030	0.62	-0.3
1,522,900	-		UW163_RS22030	0.62	-0.0
1,522,900	-		UW163_RS22030	0.62	-0.1
1,522,965	+		UW163_RS22030	0.66	-0.7
1,522,965	+		UW163_RS22030	0.66	-0.2
1,522,966	-		UW163_RS22030	0.66	-1.7
1,523,058	+		UW163_RS22030	0.73	-0.8
1,523,118	+		UW163_RS22030	0.77	+1.3
1,523,118	+		UW163_RS22030	0.77	+0.0
1,523,118	+		UW163_RS22030	0.77	+0.3
1,523,118	+		UW163_RS22030	0.77	+0.9
1,523,119	-		UW163_RS22030	0.77	+0.0
1,523,385	+				+0.2
1,523,385	+				+2.2
1,523,385	+				-0.6
1,523,385	+				+0.3
1,523,385	+				-0.6
1,523,385	+				-1.7
1,523,385	+				+0.1
1,523,385	+				-0.4
1,523,385	+				-0.5
1,523,385	+				-1.0
1,523,385	+				-0.1
1,523,385	+				+0.7
1,523,385	+				-0.1
1,523,385	+				+0.1
1,523,385	+				+0.6
1,523,386	-				+0.1
1,523,386	-				-0.0
1,523,386	-				+0.2
1,523,386	-				+0.1
1,523,386	-				+0.3
1,523,386	-				+0.2
1,523,488	+				-1.1
1,523,533	+				-0.1
1,523,534	-				-0.5
1,523,648	+		UW163_RS22035	0.17	+0.3
1,523,702	+		UW163_RS22035	0.25	-0.7
1,523,702	+		UW163_RS22035	0.25	-0.4
1,523,702	+		UW163_RS22035	0.25	-0.4
1,523,703	-		UW163_RS22035	0.26	-2.0
1,523,703	-		UW163_RS22035	0.26	-0.6
1,523,708	+		UW163_RS22035	0.26	-1.3
1,523,709	-		UW163_RS22035	0.27	+1.3
1,523,857	+		UW163_RS22035	0.51	+1.1
1,523,857	+		UW163_RS22035	0.51	-0.2
1,523,858	-		UW163_RS22035	0.51	-0.4
1,523,943	-		UW163_RS22035	0.65	+1.2
1,524,047	+		UW163_RS22035	0.81	-0.4
1,524,047	+		UW163_RS22035	0.81	-0.0
1,524,047	+		UW163_RS22035	0.81	-0.4
1,524,048	-		UW163_RS22035	0.82	+0.5
1,524,048	-		UW163_RS22035	0.82	-0.8
1,524,048	-		UW163_RS22035	0.82	-0.7
1,524,090	-		UW163_RS22035	0.88	-0.1
1,524,101	+				+0.3
1,524,102	-				-1.7
1,524,265	+				+0.1
1,524,265	+				-0.0
1,524,266	-				+0.1
1,524,266	-				-0.1
1,524,266	-				-0.2
1,524,271	+				-0.5
1,524,271	+				+0.2
1,524,271	+				+0.0
1,524,272	-				-0.7
1,524,272	-				-1.7
1,524,277	+				+1.0
1,524,277	+				-0.6