Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4568

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
5,469,558	+		Echvi_4567	0.64	-0.0
5,469,559	-		Echvi_4567	0.64	-0.2
5,469,573	+		Echvi_4567	0.64	-0.3
5,469,573	+		Echvi_4567	0.64	-0.3
5,469,573	+		Echvi_4567	0.64	-0.5
5,469,574	-		Echvi_4567	0.64	+0.2
5,469,574	-		Echvi_4567	0.64	+0.2
5,469,607	-		Echvi_4567	0.66	-0.5
5,469,661	-		Echvi_4567	0.68	+1.0
5,469,685	+		Echvi_4567	0.69	-1.1
5,469,708	+		Echvi_4567	0.70	-3.1
5,469,789	+		Echvi_4567	0.73	-0.5
5,469,789	+		Echvi_4567	0.73	+0.8
5,469,789	+		Echvi_4567	0.73	+0.7
5,469,790	-		Echvi_4567	0.73	-0.8
5,469,790	-		Echvi_4567	0.73	+1.2
5,469,790	-		Echvi_4567	0.73	+0.9
5,469,791	+		Echvi_4567	0.73	-0.8
5,469,795	+		Echvi_4567	0.74	-0.4
5,469,816	-		Echvi_4567	0.74	-0.8
5,470,108	-		Echvi_4567	0.87	+0.2
5,470,108	-		Echvi_4567	0.87	-0.7
5,470,134	+		Echvi_4567	0.88	-1.1
5,470,134	+		Echvi_4567	0.88	-0.2
5,470,136	+		Echvi_4567	0.88	-0.5
5,470,136	+		Echvi_4567	0.88	-0.2
5,470,137	-		Echvi_4567	0.88	-0.1
5,470,184	+				+0.4
5,470,185	-				+0.5
5,470,194	+				+0.8
5,470,194	+				-0.7
5,470,194	+				-0.9
5,470,194	+				+0.1
5,470,195	-				-0.0
5,470,195	-				-0.2
5,470,198	+				-2.9
5,470,199	-				+0.2
5,470,275	-				-0.0
5,470,284	+				-1.7
5,470,284	+				+1.2
5,470,285	-				-2.1
5,470,285	-				+0.1
5,470,285	-				-1.1
5,470,285	-				+0.2
5,470,286	+				-0.5
5,470,286	+				+0.6
5,470,286	+				+0.8
5,470,286	+				+0.3
5,470,287	-				-1.4
5,470,287	-				-0.3
5,470,287	-				+1.3
5,470,287	-				+1.0
5,470,347	-				+0.8
5,470,413	-				+2.4
5,470,417	-				-0.4
5,470,417	-				-1.1
5,470,419	+				+0.5
5,470,419	+				+0.1
5,470,419	+				+1.0
5,470,451	+				+3.0
5,470,500	-				-2.9
5,470,590	+		Echvi_4568	0.13	-0.0
5,470,614	-		Echvi_4568	0.15	-0.4
5,470,665	+		Echvi_4568	0.19	+1.8
5,470,666	-		Echvi_4568	0.19	+1.1
5,470,671	+		Echvi_4568	0.19	-1.0
5,470,674	+		Echvi_4568	0.20	-0.2
5,470,674	+		Echvi_4568	0.20	-0.4
5,470,675	-		Echvi_4568	0.20	-0.1
5,470,677	-		Echvi_4568	0.20	-1.4
5,470,677	-		Echvi_4568	0.20	+0.7
5,470,677	-		Echvi_4568	0.20	+0.2
5,470,677	-		Echvi_4568	0.20	+0.2
5,470,677	-		Echvi_4568	0.20	+0.1
5,470,677	-		Echvi_4568	0.20	+0.8
5,470,677	-		Echvi_4568	0.20	-0.9
5,470,679	+		Echvi_4568	0.20	-0.2
5,470,685	+		Echvi_4568	0.20	+0.4
5,470,743	+		Echvi_4568	0.25	-2.8
5,470,744	-		Echvi_4568	0.25	+0.5
5,470,996	+		Echvi_4568	0.46	-0.4
5,470,997	-		Echvi_4568	0.46	+1.8
5,470,997	-		Echvi_4568	0.46	+1.1
5,470,997	-		Echvi_4568	0.46	+1.5
5,471,007	+		Echvi_4568	0.47	+0.6
5,471,093	+		Echvi_4568	0.54	-2.8
5,471,115	-		Echvi_4568	0.55	+0.1
5,471,133	+		Echvi_4568	0.57	+1.2
5,471,133	+		Echvi_4568	0.57	+1.3
5,471,134	-		Echvi_4568	0.57	-0.5
5,471,134	-		Echvi_4568	0.57	-0.8
5,471,134	-		Echvi_4568	0.57	-1.4
5,471,135	+		Echvi_4568	0.57	-0.5
5,471,145	+				+2.8
5,471,187	+		Echvi_4568	0.61	+1.0
5,471,187	+		Echvi_4568	0.61	+0.6
5,471,187	+		Echvi_4568	0.61	+1.5
5,471,187	+		Echvi_4568	0.61	+0.2
5,471,188	-		Echvi_4568	0.61	+0.9
5,471,188	-		Echvi_4568	0.61	+0.3
5,471,346	+		Echvi_4568	0.74	-0.1
5,471,346	+		Echvi_4568	0.74	+2.4
5,471,347	-		Echvi_4568	0.74	-0.9
5,471,387	-		Echvi_4568	0.77	-0.5
5,471,397	+		Echvi_4568	0.78	-0.7
5,471,397	+		Echvi_4568	0.78	-0.9
5,471,397	+		Echvi_4568	0.78	+0.9
5,471,398	-		Echvi_4568	0.78	+0.9
5,471,400	-		Echvi_4568	0.79	-2.1
5,471,411	+		Echvi_4568	0.79	-0.2
5,471,412	-		Echvi_4568	0.80	+0.5
5,471,412	-		Echvi_4568	0.80	+0.2
5,471,506	-		Echvi_4568	0.87	-0.1
5,471,532	+		Echvi_4568	0.89	+1.5
5,471,533	-		Echvi_4568	0.89	-0.3
5,471,614	+				+2.1
5,471,614	+				+0.9
5,471,615	-				+0.1
5,471,630	+				+1.8
5,471,760	+				-0.5
5,471,760	+				+0.0
5,471,761	-				+2.3
5,471,761	-				+0.1
5,471,792	+				-0.1
5,471,828	+				+0.3
5,471,849	+				-0.1
5,471,960	+		Echvi_4569	0.18	+0.3
5,471,961	-		Echvi_4569	0.18	+1.8
5,471,961	-		Echvi_4569	0.18	+0.4
5,471,961	-		Echvi_4569	0.18	+0.1
5,472,028	+		Echvi_4569	0.23	-1.9
5,472,061	+		Echvi_4569	0.26	-0.6
5,472,082	+		Echvi_4569	0.28	+0.9
5,472,098	+		Echvi_4569	0.29	-0.7
5,472,098	+		Echvi_4569	0.29	+0.1
5,472,106	+		Echvi_4569	0.30	+0.6
5,472,119	+		Echvi_4569	0.31	-1.7
5,472,120	-		Echvi_4569	0.31	+0.3
5,472,182	+		Echvi_4569	0.36	+0.6
5,472,182	+		Echvi_4569	0.36	-1.0
5,472,183	-		Echvi_4569	0.36	-1.7
5,472,183	-		Echvi_4569	0.36	+0.2
5,472,198	+		Echvi_4569	0.37	-0.4
5,472,198	+		Echvi_4569	0.37	+0.3
5,472,199	-		Echvi_4569	0.37	-1.0
5,472,201	-		Echvi_4569	0.37	-1.0
5,472,223	-		Echvi_4569	0.39	-1.3
5,472,345	+		Echvi_4569	0.49	+0.0
5,472,349	+		Echvi_4569	0.50	-0.3
5,472,377	-		Echvi_4569	0.52	+0.8
5,472,421	+		Echvi_4569	0.56	-0.3
5,472,422	-		Echvi_4569	0.56	+0.2
5,472,556	-		Echvi_4569	0.67	-0.1
5,472,556	-		Echvi_4569	0.67	+1.4
5,472,556	-		Echvi_4569	0.67	+0.5
5,472,556	-		Echvi_4569	0.67	+0.5
5,472,638	+		Echvi_4569	0.73	-0.5
5,472,645	-		Echvi_4569	0.74	+0.5