Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4282

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
5,126,569	+				+0.1
5,126,570	-				-0.7
5,126,571	+				-1.7
5,126,581	+				+0.5
5,126,589	-				-0.0
5,126,604	+				+0.7
5,126,604	+				-0.2
5,126,604	+				-1.2
5,126,634	+				+0.8
5,126,646	-				-0.5
5,126,648	+				-0.6
5,126,648	+				-0.7
5,126,649	-				+0.8
5,126,649	-				-1.9
5,126,649	-				-1.1
5,126,766	+		Echvi_4281	0.19	+0.6
5,126,767	-		Echvi_4281	0.19	-0.6
5,126,767	-		Echvi_4281	0.19	+0.9
5,126,776	+		Echvi_4281	0.20	+0.8
5,126,776	+		Echvi_4281	0.20	+0.8
5,126,892	+		Echvi_4281	0.32	-0.1
5,126,892	+		Echvi_4281	0.32	-0.4
5,126,892	+		Echvi_4281	0.32	-1.0
5,126,893	-		Echvi_4281	0.32	+0.6
5,126,905	+		Echvi_4281	0.33	-1.7
5,126,922	+		Echvi_4281	0.35	-1.7
5,126,982	+		Echvi_4281	0.41	+1.8
5,126,982	+		Echvi_4281	0.41	-0.5
5,127,002	+		Echvi_4281	0.43	+0.8
5,127,002	+		Echvi_4281	0.43	+0.2
5,127,002	+		Echvi_4281	0.43	+0.2
5,127,002	+		Echvi_4281	0.43	+1.0
5,127,003	-		Echvi_4281	0.43	+0.4
5,127,011	-		Echvi_4281	0.44	-0.5
5,127,021	+		Echvi_4281	0.45	-0.1
5,127,021	+		Echvi_4281	0.45	+2.0
5,127,024	+		Echvi_4281	0.45	-1.2
5,127,068	+		Echvi_4281	0.50	+0.4
5,127,069	-		Echvi_4281	0.50	+0.1
5,127,077	-		Echvi_4281	0.51	-0.5
5,127,097	-		Echvi_4281	0.53	+0.1
5,127,122	-		Echvi_4281	0.56	-1.1
5,127,122	-		Echvi_4281	0.56	+0.2
5,127,195	+		Echvi_4281	0.63	+0.3
5,127,235	+		Echvi_4281	0.67	-1.1
5,127,236	-		Echvi_4281	0.67	-0.5
5,127,348	-		Echvi_4281	0.79	-0.1
5,127,348	-		Echvi_4281	0.79	-0.3
5,127,348	-		Echvi_4281	0.79	-0.2
5,127,348	-		Echvi_4281	0.79	-0.7
5,127,348	-		Echvi_4281	0.79	-0.5
5,127,350	+		Echvi_4281	0.79	+0.6
5,127,350	+		Echvi_4281	0.79	-0.9
5,127,402	-		Echvi_4281	0.85	+0.4
5,127,441	+		Echvi_4281	0.89	-0.2
5,127,496	-				+0.3
5,127,576	+				-0.3
5,127,576	+				-1.1
5,127,576	+				-1.3
5,127,585	+		Echvi_4282	0.11	-1.2
5,127,585	+		Echvi_4282	0.11	-1.0
5,127,586	-		Echvi_4282	0.11	+0.8
5,127,594	-		Echvi_4282	0.14	+0.6
5,127,671	-		Echvi_4282	0.38	+0.6
5,127,671	-		Echvi_4282	0.38	+1.0
5,127,674	-		Echvi_4282	0.39	-0.3
5,127,674	-		Echvi_4282	0.39	-1.0
5,127,674	-		Echvi_4282	0.39	-0.4
5,127,674	-		Echvi_4282	0.39	-0.1
5,127,674	-		Echvi_4282	0.39	-2.2
5,127,675	+		Echvi_4282	0.39	+0.2
5,127,675	+		Echvi_4282	0.39	-1.0
5,127,676	-		Echvi_4282	0.39	+0.8
5,127,738	-		Echvi_4282	0.58	-0.5
5,127,810	+		Echvi_4282	0.81	+0.1
5,127,811	-		Echvi_4282	0.81	-1.4
5,127,817	-		Echvi_4282	0.83	+0.2
5,127,817	-		Echvi_4282	0.83	+0.0
5,127,855	-				-0.3
5,127,855	-				-0.2
5,127,988	+				-1.7
5,127,989	-				-0.4
5,127,999	-				+0.1
5,128,043	+				-0.6
5,128,060	+				-0.6
5,128,060	+				+1.0
5,128,061	-				+0.6
5,128,061	-				-0.5
5,128,065	+				+0.3
5,128,065	+				-0.9
5,128,066	-				-0.3
5,128,066	-				-0.3
5,128,066	-				+0.6
5,128,079	-				-1.1
5,128,091	-				-1.2
5,128,127	-				-1.2
5,128,127	-				-0.3