Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3933

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
4,708,531	+		Echvi_3932	0.44	-0.8
4,708,531	+		Echvi_3932	0.44	-0.1
4,708,532	-		Echvi_3932	0.44	-1.0
4,708,585	+		Echvi_3932	0.49	-1.3
4,708,585	+		Echvi_3932	0.49	-0.2
4,708,586	-		Echvi_3932	0.49	+0.0
4,708,595	+		Echvi_3932	0.49	+1.7
4,708,614	+		Echvi_3932	0.51	+0.5
4,708,615	-		Echvi_3932	0.51	-0.6
4,708,626	-		Echvi_3932	0.52	-0.2
4,708,660	+		Echvi_3932	0.55	+2.0
4,708,774	-		Echvi_3932	0.64	+0.2
4,708,811	+		Echvi_3932	0.67	+1.0
4,708,811	+		Echvi_3932	0.67	-1.2
4,708,812	-		Echvi_3932	0.67	+0.4
4,708,812	-		Echvi_3932	0.67	+0.2
4,708,812	-		Echvi_3932	0.67	-0.5
4,708,852	-		Echvi_3932	0.70	-0.1
4,708,904	+		Echvi_3932	0.74	-1.3
4,708,905	-		Echvi_3932	0.74	-0.3
4,708,912	+		Echvi_3932	0.75	-0.4
4,708,912	+		Echvi_3932	0.75	-0.5
4,708,912	+		Echvi_3932	0.75	-0.2
4,708,912	+		Echvi_3932	0.75	-2.2
4,708,912	+		Echvi_3932	0.75	+1.7
4,708,912	+		Echvi_3932	0.75	+0.0
4,708,912	+		Echvi_3932	0.75	-0.1
4,708,912	+		Echvi_3932	0.75	-2.0
4,708,913	-		Echvi_3932	0.75	-0.0
4,708,990	+		Echvi_3932	0.81	+0.0
4,708,990	+		Echvi_3932	0.81	-1.7
4,708,995	-		Echvi_3932	0.82	+0.5
4,709,145	+				+0.2
4,709,145	+				-2.0
4,709,210	-				+0.1
4,709,327	+				-0.3
4,709,369	+				-0.3
4,709,389	+				-1.0
4,709,430	-				-0.2
4,709,430	-				+0.1
4,709,430	-				-0.1
4,709,487	-				-0.0
4,709,519	+				-0.9
4,709,565	-				-0.0
4,709,644	+				-0.7
4,709,644	+				+1.7
4,709,645	-				+1.0
4,709,645	-				-0.2
4,709,645	-				-0.5
4,709,675	+		Echvi_3933	0.11	+0.4
4,709,807	-		Echvi_3933	0.19	+0.7
4,709,807	-		Echvi_3933	0.19	+0.1
4,709,809	+		Echvi_3933	0.19	+1.0
4,709,809	+		Echvi_3933	0.19	+3.3
4,709,809	+		Echvi_3933	0.19	+0.2
4,709,809	+		Echvi_3933	0.19	-0.9
4,709,810	-		Echvi_3933	0.19	-0.2
4,709,810	-		Echvi_3933	0.19	+0.8
4,709,810	-		Echvi_3933	0.19	+1.5
4,709,811	+		Echvi_3933	0.19	+0.5
4,709,986	-		Echvi_3933	0.30	+1.3
4,709,993	+		Echvi_3933	0.30	-1.7
4,710,001	-		Echvi_3933	0.31	+0.2
4,710,011	+		Echvi_3933	0.31	-0.4
4,710,012	-		Echvi_3933	0.31	+0.7
4,710,057	+		Echvi_3933	0.34	-0.9
4,710,150	+		Echvi_3933	0.40	-0.1
4,710,180	+		Echvi_3933	0.42	-0.1
4,710,185	+		Echvi_3933	0.42	+0.1
4,710,185	+		Echvi_3933	0.42	-2.5
4,710,186	-		Echvi_3933	0.42	-0.4
4,710,186	-		Echvi_3933	0.42	+0.6
4,710,266	-		Echvi_3933	0.47	-0.6
4,710,332	+		Echvi_3933	0.51	-0.8
4,710,399	+		Echvi_3933	0.55	-1.4
4,710,400	-		Echvi_3933	0.55	-0.0
4,710,400	-		Echvi_3933	0.55	+0.7
4,710,400	-		Echvi_3933	0.55	+0.1
4,710,400	-		Echvi_3933	0.55	+1.2
4,710,414	+		Echvi_3933	0.56	-0.1
4,710,453	-		Echvi_3933	0.59	+0.1
4,710,529	+		Echvi_3933	0.63	+0.4
4,710,780	+		Echvi_3933	0.79	-0.3
4,710,780	+		Echvi_3933	0.79	+1.4
4,710,792	-		Echvi_3933	0.79	+1.8
4,710,845	+		Echvi_3933	0.83	+0.5
4,710,897	+		Echvi_3933	0.86	-0.3
4,710,908	+		Echvi_3933	0.87	-0.7
4,710,978	+				-0.2
4,711,112	-				+1.0
4,711,257	-				-1.7
4,711,257	-				+0.7
4,711,446	+				+0.5
4,711,446	+				+0.1
4,711,450	+				+3.7
4,711,462	+				-0.2
4,711,534	+				-0.1
4,711,534	+				+0.8
4,711,535	-				-0.5
4,711,535	-				+0.6
4,711,608	+				-0.3
4,711,609	-				-0.6
4,711,687	-				-1.3
4,711,700	+				+0.9
4,711,704	+				-0.6
4,711,705	-				+0.4
4,711,705	-				+0.4
4,711,733	+				-0.9
4,711,734	-				-0.4
4,711,775	+				+0.5
4,711,775	+				-0.6
4,711,776	-				+0.1
4,711,783	+				+0.5
4,711,784	-				+0.1
4,711,842	+				-0.1
4,711,849	+				+0.8
4,711,853	+				-0.6
4,711,853	+				+0.2
4,711,853	+				-0.6
4,711,853	+				-0.2
4,711,853	+				-0.7
4,711,854	-				+0.7
4,711,854	-				-0.1
4,711,854	-				+1.7
4,711,859	+				+0.7
4,711,859	+				-0.9
4,711,860	-				-0.3
4,711,860	-				-0.1
4,711,867	-				-0.5
4,711,867	-				+0.4
4,711,868	+				-1.8
4,711,868	+				-0.4
4,711,869	-				+0.4
4,711,869	-				-0.5
4,711,869	-				-0.9
4,711,869	-				-0.6
4,711,870	+				+1.0
4,711,870	+				-0.1
4,711,870	+				+0.5
4,711,870	+				+0.7
4,711,870	+				+2.0
4,711,870	+				+0.1
4,711,870	+				+1.1
4,711,870	+				-0.3
4,711,871	-				+0.8
4,711,871	-				-0.1
4,711,871	-				-0.4
4,711,871	-				-0.7
4,711,871	-				+1.1
4,712,002	+				-0.3
4,712,074	+				-0.6
4,712,074	+				-0.1
4,712,075	-				-0.5
4,712,075	-				+1.2