Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3447

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
4,076,632	+		Echvi_3446	0.40	-0.0
4,076,632	+		Echvi_3446	0.40	-0.4
4,076,633	-		Echvi_3446	0.41	-0.9
4,076,662	+		Echvi_3446	0.43	-0.4
4,076,663	-		Echvi_3446	0.43	-0.2
4,076,663	-		Echvi_3446	0.43	+0.3
4,076,663	-		Echvi_3446	0.43	-0.5
4,076,670	+		Echvi_3446	0.43	+0.6
4,076,718	+		Echvi_3446	0.46	-0.3
4,076,759	-		Echvi_3446	0.49	+0.0
4,076,853	+		Echvi_3446	0.56	-1.0
4,076,853	+		Echvi_3446	0.56	+0.1
4,076,854	-		Echvi_3446	0.56	-1.0
4,076,854	-		Echvi_3446	0.56	-0.6
4,076,859	+		Echvi_3446	0.56	+0.7
4,076,860	-		Echvi_3446	0.56	+1.6
4,076,875	+		Echvi_3446	0.57	+1.0
4,076,875	+		Echvi_3446	0.57	+0.4
4,076,876	-		Echvi_3446	0.57	-0.2
4,076,876	-		Echvi_3446	0.57	+0.6
4,076,906	-		Echvi_3446	0.59	+0.2
4,076,974	+		Echvi_3446	0.64	-1.1
4,076,974	+		Echvi_3446	0.64	-1.0
4,076,974	+		Echvi_3446	0.64	-0.2
4,076,974	+		Echvi_3446	0.64	-0.4
4,076,974	+		Echvi_3446	0.64	-0.7
4,076,974	+		Echvi_3446	0.64	+0.0
4,076,974	+		Echvi_3446	0.64	+0.3
4,076,975	-		Echvi_3446	0.64	+0.5
4,076,975	-		Echvi_3446	0.64	-1.2
4,076,975	-		Echvi_3446	0.64	+1.1
4,076,975	-		Echvi_3446	0.64	+0.3
4,076,975	-		Echvi_3446	0.64	-0.4
4,076,976	+		Echvi_3446	0.64	+0.5
4,077,094	-		Echvi_3446	0.73	-1.4
4,077,094	-		Echvi_3446	0.73	-0.3
4,077,109	+		Echvi_3446	0.74	-0.2
4,077,117	+		Echvi_3446	0.74	-0.7
4,077,118	-		Echvi_3446	0.74	+0.6
4,077,118	-		Echvi_3446	0.74	+0.6
4,077,118	-		Echvi_3446	0.74	+0.1
4,077,118	-		Echvi_3446	0.74	+0.4
4,077,118	-		Echvi_3446	0.74	-0.0
4,077,125	+		Echvi_3446	0.75	+0.6
4,077,126	-		Echvi_3446	0.75	-0.7
4,077,136	-		Echvi_3446	0.76	+0.6
4,077,270	+		Echvi_3446	0.85	-0.9
4,077,271	-		Echvi_3446	0.85	+1.0
4,077,308	-		Echvi_3446	0.87	+1.2
4,077,328	+		Echvi_3446	0.89	+0.4
4,077,331	-		Echvi_3446	0.89	+0.4
4,077,331	-		Echvi_3446	0.89	-2.0
4,077,331	-		Echvi_3446	0.89	-0.9
4,077,333	+		Echvi_3446	0.89	-0.2
4,077,334	-		Echvi_3446	0.89	-0.1
4,077,334	-		Echvi_3446	0.89	+0.8
4,077,335	+		Echvi_3446	0.89	-1.2
4,077,335	+		Echvi_3446	0.89	+1.0
4,077,335	+		Echvi_3446	0.89	+1.0
4,077,336	-		Echvi_3446	0.89	-0.2
4,077,336	-		Echvi_3446	0.89	-0.1
4,077,336	-		Echvi_3446	0.89	+0.6
4,077,380	+				+1.6
4,077,381	-				+0.1
4,077,468	-				+0.5
4,077,474	-				-0.2
4,077,500	-				-1.3
4,077,500	-				+0.5
4,077,518	+				-0.0
4,077,519	-				+0.0
4,077,519	-				-0.2
4,077,520	+				-0.8
4,077,520	+				-1.0
4,077,528	+				+0.4
4,077,533	+				-0.1
4,077,534	-				+0.5
4,077,543	-				-0.1
4,077,567	+				-2.5
4,077,585	-				+0.4
4,077,595	-				-0.1
4,077,630	+				-1.4
4,077,631	-				+0.6
4,077,658	+				+0.2
4,077,659	-				-1.5
4,077,664	+				-0.9
4,077,664	+				-0.7
4,077,705	+		Echvi_3447	0.11	-1.0
4,077,715	+		Echvi_3447	0.12	+1.2
4,077,723	-		Echvi_3447	0.13	-1.0
4,077,757	-		Echvi_3447	0.18	+0.2
4,077,825	-		Echvi_3447	0.28	+0.3
4,077,837	+		Echvi_3447	0.30	+0.2
4,077,837	+		Echvi_3447	0.30	-1.2
4,077,838	-		Echvi_3447	0.30	-0.0
4,077,839	+		Echvi_3447	0.30	-1.0
4,077,839	+		Echvi_3447	0.30	-0.5
4,077,839	+		Echvi_3447	0.30	+1.3
4,077,840	-		Echvi_3447	0.30	+1.8
4,077,840	-		Echvi_3447	0.30	+0.0
4,077,840	-		Echvi_3447	0.30	-2.1
4,077,844	-		Echvi_3447	0.31	-1.1
4,077,875	+		Echvi_3447	0.35	-0.5
4,077,891	+		Echvi_3447	0.37	-2.1
4,077,904	-		Echvi_3447	0.39	-0.8
4,077,982	+		Echvi_3447	0.51	+0.8
4,077,995	-		Echvi_3447	0.52	+0.2
4,078,032	-		Echvi_3447	0.58	-2.0
4,078,036	+		Echvi_3447	0.58	+0.8
4,078,037	-		Echvi_3447	0.58	-1.8
4,078,038	+		Echvi_3447	0.59	+0.6
4,078,055	-		Echvi_3447	0.61	+1.1
4,078,116	-		Echvi_3447	0.70	-1.0
4,078,125	+		Echvi_3447	0.71	+0.7
4,078,125	+		Echvi_3447	0.71	-0.7
4,078,125	+		Echvi_3447	0.71	-0.6
4,078,126	-		Echvi_3447	0.71	-0.6
4,078,224	+		Echvi_3447	0.85	-0.2
4,078,224	+		Echvi_3447	0.85	-1.2
4,078,226	+		Echvi_3447	0.85	-1.0
4,078,226	+		Echvi_3447	0.85	-0.4
4,078,248	+		Echvi_3447	0.89	-1.0
4,078,313	+				+0.5
4,078,352	+				-0.7
4,078,352	+				+0.0
4,078,352	+				-0.1
4,078,353	-				+0.7
4,078,373	+				+2.2
4,078,373	+				+0.0
4,078,374	-				-0.0
4,078,426	+				-0.4
4,078,427	-				+0.2
4,078,427	-				+0.5
4,078,437	-				+0.8
4,078,523	-		Echvi_3448	0.22	+1.1
4,078,525	+		Echvi_3448	0.22	-0.3
4,078,525	+		Echvi_3448	0.22	+0.5
4,078,526	-		Echvi_3448	0.23	+2.1
4,078,526	-		Echvi_3448	0.23	+1.4
4,078,536	-		Echvi_3448	0.25	+0.9
4,078,561	-		Echvi_3448	0.29	+1.2
4,078,561	-		Echvi_3448	0.29	+1.1
4,078,561	-		Echvi_3448	0.29	+1.2
4,078,661	+		Echvi_3448	0.48	+0.0
4,078,661	+		Echvi_3448	0.48	-0.7
4,078,662	-		Echvi_3448	0.49	+0.4
4,078,662	-		Echvi_3448	0.49	+0.6
4,078,726	-		Echvi_3448	0.61	+1.1
4,078,776	+		Echvi_3448	0.70	+0.1
4,078,777	-		Echvi_3448	0.70	+2.2
4,078,777	-		Echvi_3448	0.70	+1.2
4,078,793	+		Echvi_3448	0.74	+0.1
4,078,794	-		Echvi_3448	0.74	+0.6
4,078,794	-		Echvi_3448	0.74	-0.5
4,078,808	+		Echvi_3448	0.76	-0.0
4,078,808	+		Echvi_3448	0.76	+0.2
4,078,844	+		Echvi_3448	0.83	+0.6
4,078,845	-		Echvi_3448	0.83	-0.2
4,078,847	+		Echvi_3448	0.84	-1.4
4,078,867	-		Echvi_3448	0.88	+0.4
4,078,870	+		Echvi_3448	0.88	-0.2
4,078,888	+				+0.0
4,078,955	+				+0.7
4,078,956	-				+0.6
4,078,961	-				-0.6
4,079,001	+				+0.1
4,079,006	+				-0.1
4,079,007	-				+0.6
4,079,007	-				-0.0
4,079,010	+				-0.3
4,079,011	-				+0.4
4,079,011	-				+0.3
4,079,011	-				-1.0
4,079,011	-				-0.2
4,079,043	+				-0.4
4,079,043	+				+0.7
4,079,044	-				-1.6
4,079,044	-				+0.2
4,079,044	-				+0.5
4,079,044	-				-0.2
4,079,081	+				-1.6
4,079,152	+		Echvi_3449	0.21	-1.1
4,079,153	-		Echvi_3449	0.21	-1.7
4,079,171	+		Echvi_3449	0.24	+0.6
4,079,171	+		Echvi_3449	0.24	-1.0
4,079,171	+		Echvi_3449	0.24	-3.7
4,079,177	+		Echvi_3449	0.25	-1.2
4,079,178	-		Echvi_3449	0.25	+0.1
4,079,178	-		Echvi_3449	0.25	-0.6
4,079,197	+		Echvi_3449	0.28	+0.2
4,079,197	+		Echvi_3449	0.28	-1.1
4,079,233	+		Echvi_3449	0.34	-0.4
4,079,234	-		Echvi_3449	0.35	+0.5
4,079,251	+		Echvi_3449	0.37	+0.1
4,079,268	+		Echvi_3449	0.40	-0.1