Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3367

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
3,973,943	-				+0.3
3,973,960	+				+0.2
3,974,004	+				-1.2
3,974,006	-				-0.4
3,974,010	+				-0.7
3,974,032	+				+1.6
3,974,032	+				-0.7
3,974,033	-				-0.2
3,974,066	-				+0.7
3,974,066	-				+0.9
3,974,207	-				+0.4
3,974,235	-				-1.2
3,974,247	-				+1.6
3,974,247	-				-0.2
3,974,249	+				+0.3
3,974,249	+				-0.7
3,974,249	+				-3.0
3,974,249	+				-0.1
3,974,249	+				-0.0
3,974,249	+				-0.3
3,974,249	+				+0.1
3,974,249	+				-0.2
3,974,249	+				-0.1
3,974,250	-				+0.3
3,974,250	-				-1.7
3,974,256	+				-1.1
3,974,256	+				-0.3
3,974,256	+				+0.4
3,974,256	+				+0.2
3,974,257	-				+0.4
3,974,257	-				-0.4
3,974,258	+				+0.8
3,974,270	+				-0.4
3,974,271	-				+0.3
3,974,287	+				-0.8
3,974,379	+		Echvi_3367	0.12	-0.1
3,974,416	+		Echvi_3367	0.16	+0.2
3,974,416	+		Echvi_3367	0.16	-1.4
3,974,416	+		Echvi_3367	0.16	-0.2
3,974,417	-		Echvi_3367	0.16	+0.1
3,974,417	-		Echvi_3367	0.16	+0.6
3,974,417	-		Echvi_3367	0.16	+0.3
3,974,418	+		Echvi_3367	0.16	-0.4
3,974,418	+		Echvi_3367	0.16	+0.1
3,974,418	+		Echvi_3367	0.16	-0.9
3,974,418	+		Echvi_3367	0.16	+0.8
3,974,418	+		Echvi_3367	0.16	-2.1
3,974,418	+				+1.2
3,974,418	+		Echvi_3367	0.16	-0.8
3,974,418	+		Echvi_3367	0.16	+2.0
3,974,419	-		Echvi_3367	0.16	+1.6
3,974,419	-		Echvi_3367	0.16	+1.9
3,974,419	-		Echvi_3367	0.16	-0.1
3,974,419	-		Echvi_3367	0.16	+0.3
3,974,419	-		Echvi_3367	0.16	-0.6
3,974,420	+		Echvi_3367	0.17	+0.6
3,974,421	-		Echvi_3367	0.17	+2.0
3,974,426	+		Echvi_3367	0.17	+0.4
3,974,426	+		Echvi_3367	0.17	+0.1
3,974,427	-		Echvi_3367	0.17	+1.6
3,974,427	-		Echvi_3367	0.17	+1.3
3,974,427	-		Echvi_3367	0.17	+0.8
3,974,428	+		Echvi_3367	0.17	+0.8
3,974,428	+		Echvi_3367	0.17	-0.7
3,974,444	+		Echvi_3367	0.19	-0.1
3,974,452	+		Echvi_3367	0.20	+0.6
3,974,497	-		Echvi_3367	0.24	+0.6
3,974,497	-		Echvi_3367	0.24	-0.4
3,974,573	+		Echvi_3367	0.32	-0.0
3,974,647	-		Echvi_3367	0.40	+0.1
3,974,762	+		Echvi_3367	0.52	-0.5
3,974,763	-		Echvi_3367	0.52	+0.2
3,974,766	+		Echvi_3367	0.52	+0.5
3,974,767	-		Echvi_3367	0.52	+0.3
3,974,838	-		Echvi_3367	0.59	-2.6
3,974,867	-		Echvi_3367	0.62	+0.1
3,974,867	-		Echvi_3367	0.62	-0.6
3,974,933	-		Echvi_3367	0.69	-1.4
3,974,933	-				+0.1
3,974,965	-		Echvi_3367	0.72	+0.2
3,975,006	+		Echvi_3367	0.77	-0.1
3,975,011	+		Echvi_3367	0.77	+0.1
3,975,011	+		Echvi_3367	0.77	+0.1
3,975,011	+		Echvi_3367	0.77	+1.3
3,975,012	-		Echvi_3367	0.77	+1.2
3,975,012	-		Echvi_3367	0.77	-0.8
3,975,018	-		Echvi_3367	0.78	+1.0
3,975,066	-		Echvi_3367	0.83	+0.3
3,975,066	-		Echvi_3367	0.83	-0.8
3,975,078	-		Echvi_3367	0.84	-0.6
3,975,105	+		Echvi_3367	0.87	+0.6
3,975,107	+		Echvi_3367	0.87	+0.2
3,975,127	-		Echvi_3367	0.89	-0.7
3,975,174	-				+0.6
3,975,250	+				-0.4
3,975,314	+				+0.0
3,975,428	-		Echvi_3368	0.18	+1.1
3,975,514	-		Echvi_3368	0.27	-0.4
3,975,514	-		Echvi_3368	0.27	+0.4
3,975,514	-		Echvi_3368	0.27	+0.9
3,975,514	-				+2.6
3,975,514	-		Echvi_3368	0.27	-0.2
3,975,592	+		Echvi_3368	0.36	+1.2
3,975,652	+		Echvi_3368	0.43	-0.7
3,975,653	-		Echvi_3368	0.43	+0.3
3,975,655	-		Echvi_3368	0.43	-0.8
3,975,711	+		Echvi_3368	0.50	-0.2
3,975,711	+		Echvi_3368	0.50	-0.1
3,975,720	+		Echvi_3368	0.51	-1.1
3,975,720	+		Echvi_3368	0.51	+0.3
3,975,723	+		Echvi_3368	0.51	-0.5
3,975,723	+		Echvi_3368	0.51	-0.4
3,975,738	-		Echvi_3368	0.53	-1.6
3,975,738	-		Echvi_3368	0.53	+0.7
3,975,738	-		Echvi_3368	0.53	+0.7
3,975,748	-		Echvi_3368	0.54	-0.0
3,975,829	+		Echvi_3368	0.63	-0.5
3,975,829	+		Echvi_3368	0.63	-0.4
3,975,831	+		Echvi_3368	0.63	-1.7
3,975,928	+		Echvi_3368	0.74	+3.0
3,976,002	+		Echvi_3368	0.82	-2.2
3,976,003	-		Echvi_3368	0.82	-1.5
3,976,003	-		Echvi_3368	0.82	-0.8
3,976,153	-				+0.7