Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2953

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
3,530,374	+				-0.6
3,530,375	-				+0.1
3,530,380	+				-0.1
3,530,508	+		Echvi_2953	0.25	-0.9
3,530,523	-		Echvi_2953	0.28	-1.2
3,530,586	+		Echvi_2953	0.38	-2.3
3,530,628	-		Echvi_2953	0.45	-0.6
3,530,867	-		Echvi_2953	0.84	-0.3
3,530,903	+				-0.5
3,530,934	-				-0.7
3,530,934	-				-1.0
3,530,934	-				+0.2
3,530,969	-				+2.1
3,530,969	-				-1.3
3,531,024	+				-1.5
3,531,031	+				-3.0
3,531,031	+				-3.1
3,531,032	-				+2.0
3,531,032	-				-1.5
3,531,044	-				-0.4
3,531,089	+				-0.1
3,531,090	-				+0.1
3,531,090	-				-0.3
3,531,090	-				-0.7
3,531,098	+				-0.8
3,531,109	+				-1.7
3,531,109	+				-0.8
3,531,204	+				+1.5
3,531,210	+				-0.0
3,531,210	+				-0.7
3,531,232	+		Echvi_2954	0.11	+1.4
3,531,232	+		Echvi_2954	0.11	+1.1
3,531,233	-		Echvi_2954	0.11	+0.7
3,531,289	-		Echvi_2954	0.15	-0.6
3,531,293	-		Echvi_2954	0.16	+0.4
3,531,357	+		Echvi_2954	0.21	-0.7
3,531,375	+		Echvi_2954	0.22	-0.9
3,531,416	+		Echvi_2954	0.25	+0.1
3,531,416	+		Echvi_2954	0.25	-0.3
3,531,429	+		Echvi_2954	0.26	-1.3
3,531,430	-		Echvi_2954	0.26	-0.9
3,531,430	-		Echvi_2954	0.26	-2.2
3,531,563	-		Echvi_2954	0.37	+0.6
3,531,565	-		Echvi_2954	0.37	+0.3
3,531,644	+		Echvi_2954	0.43	-0.2
3,531,645	-		Echvi_2954	0.43	-0.1
3,531,645	-		Echvi_2954	0.43	+0.4
3,531,718	+		Echvi_2954	0.49	-1.9
3,531,719	-				-0.9
3,531,754	-		Echvi_2954	0.51	-0.2
3,531,784	-		Echvi_2954	0.54	+0.3
3,531,815	-		Echvi_2954	0.56	-1.6
3,531,845	-		Echvi_2954	0.59	-1.1
3,531,925	+		Echvi_2954	0.65	+0.0
3,531,925	+		Echvi_2954	0.65	+0.1
3,531,926	-		Echvi_2954	0.65	-0.1
3,531,930	-		Echvi_2954	0.65	-2.8
3,531,936	+		Echvi_2954	0.66	-0.3
3,531,936	+				+2.7
3,531,937	-		Echvi_2954	0.66	-1.3