Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2162

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
2,571,966	+		Echvi_2161	0.64	+0.5
2,571,966	+		Echvi_2161	0.64	-0.0
2,572,001	+		Echvi_2161	0.70	+0.8
2,572,026	-		Echvi_2161	0.74	+1.1
2,572,033	-		Echvi_2161	0.75	+1.1
2,572,092	+		Echvi_2161	0.85	-1.7
2,572,131	+				-0.9
2,572,131	+				+0.0
2,572,131	+				-0.6
2,572,132	-				+1.1
2,572,132	-				-0.4
2,572,133	+				+1.7
2,572,133	+				-0.5
2,572,134	-				-2.0
2,572,194	+				-0.3
2,572,195	-				-0.4
2,572,216	+				-0.7
2,572,217	-				-0.7
2,572,217	-				-0.5
2,572,244	-				-1.0
2,572,283	+				+0.5
2,572,284	-				+0.6
2,572,307	+				+1.0
2,572,307	+				+0.2
2,572,307	+				-0.9
2,572,308	-				+0.2
2,572,316	-				-1.5
2,572,316	-				-0.6
2,572,336	+				-0.7
2,572,337	-				-0.0
2,572,359	+				+0.5
2,572,359	+				-0.2
2,572,371	+				-0.1
2,572,397	-				+0.2
2,572,402	+				-1.1
2,572,402	+				+0.0
2,572,404	+				-1.0
2,572,404	+				+0.2
2,572,405	-				+0.4
2,572,408	-				-0.8
2,572,408	-				+0.4
2,572,417	+				-1.4
2,572,418	-				-1.0
2,572,520	-				-0.4
2,572,526	+				-1.3
2,572,527	-				-2.9
2,572,533	-				+0.8
2,572,533	-				-1.0
2,572,594	+				-0.3
2,572,594	+				-0.0
2,572,595	-				+0.9
2,572,595	-				+0.8
2,572,608	-				-3.1
2,572,615	+				+0.3
2,572,695	+				-0.7
2,572,696	-				-1.2
2,572,762	+				+0.4
2,573,049	+		Echvi_2162	0.13	-0.3
2,573,049	+		Echvi_2162	0.13	-2.3
2,573,059	+		Echvi_2162	0.14	+0.3
2,573,127	+		Echvi_2162	0.20	+0.5
2,573,138	-		Echvi_2162	0.22	-0.1
2,573,147	+		Echvi_2162	0.22	+0.2
2,573,148	-		Echvi_2162	0.23	+0.2
2,573,148	-		Echvi_2162	0.23	-0.4
2,573,175	+		Echvi_2162	0.25	+0.4
2,573,218	-		Echvi_2162	0.29	+0.5
2,573,218	-		Echvi_2162	0.29	-0.3
2,573,240	-		Echvi_2162	0.31	-0.3
2,573,248	-		Echvi_2162	0.32	-0.2
2,573,248	-		Echvi_2162	0.32	+0.0
2,573,566	+		Echvi_2162	0.63	-1.1
2,573,580	+		Echvi_2162	0.64	-2.9
2,573,581	-		Echvi_2162	0.64	-0.6
2,573,596	-		Echvi_2162	0.65	-1.1
2,573,624	+		Echvi_2162	0.68	-0.8
2,573,624	+		Echvi_2162	0.68	+0.4
2,573,625	-		Echvi_2162	0.68	-2.1
2,573,625	-		Echvi_2162	0.68	-0.8
2,573,625	-		Echvi_2162	0.68	+0.1
2,573,625	-		Echvi_2162	0.68	-0.4
2,573,940	+				-0.5
2,573,946	+				-1.0
2,573,946	+				-0.8
2,573,946	+				-0.2
2,573,947	-				+2.0
2,573,947	-				-0.1
2,573,947	-				-1.3
2,573,947	-				-0.6
2,573,949	-				+0.6
2,573,949	-				-1.6
2,573,964	-				+0.4
2,573,968	+				-0.8
2,573,968	+				-1.2
2,573,969	-				-0.2
2,573,988	-				+0.2
2,574,020	-				+0.7
2,574,052	+				-0.5
2,574,053	-				-0.3
2,574,071	-				-0.0
2,574,151	+				-0.0
2,574,151	+				-0.6
2,574,151	+				-1.2
2,574,269	+				+0.0
2,574,280	+				+0.5
2,574,281	-				+0.5
2,574,305	-				-0.2
2,574,328	-				+0.3
2,574,329	+				+0.1
2,574,329	+				+0.2
2,574,329	+				+1.4
2,574,329	+				-0.6
2,574,330	-				-0.5
2,574,330	-				+1.2
2,574,330	-				-0.8
2,574,342	-				+0.1
2,574,356	+				-0.6
2,574,375	-		Echvi_2163	0.11	-0.4
2,574,533	+		Echvi_2163	0.15	+1.5
2,574,533	+		Echvi_2163	0.15	-0.3
2,574,557	-		Echvi_2163	0.16	-0.3
2,574,560	+		Echvi_2163	0.16	+0.5
2,574,560	+		Echvi_2163	0.16	+0.1
2,574,561	-		Echvi_2163	0.16	+0.2
2,574,696	-		Echvi_2163	0.20	-0.2
2,574,696	-		Echvi_2163	0.20	+1.1
2,574,715	+		Echvi_2163	0.20	-0.4
2,574,776	+		Echvi_2163	0.22	+0.1
2,574,791	+		Echvi_2163	0.23	-1.0
2,574,830	-		Echvi_2163	0.24	+1.0
2,574,841	+		Echvi_2163	0.24	+0.4
2,574,872	-		Echvi_2163	0.25	-1.0
2,574,881	-		Echvi_2163	0.25	-0.8
2,574,941	+		Echvi_2163	0.27	-0.7
2,574,942	-		Echvi_2163	0.27	+0.1